Durio zibethinus (durian): 111311649
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Entry
111311649 CDS
T05242
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111311649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111311649
03012 Translation factors [BR:
dzi03012
]
111311649
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111311649
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111311649
Translation factors [BR:
dzi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111311649
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
T2SSE
Rad17
AAA_19
ATPase
FoP_duplication
ABC_tran
BEX
Motif
Other DBs
NCBI-GeneID:
111311649
NCBI-ProteinID:
XP_022766946
UniProt:
A0A6P6AQ50
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MSLRLLSANNKLTLPLSKRLPLASALISPFPPLQISSFAMSYRPNYQGSRRGGGPNSGRG
GGRRGGGGGGRGGRGGEQRWWDPVWRAERLRQKAAEMEVLDEVEWWDKMDQMKKGGEQEM
IIKRNFSRSDQQVLSDMAYQLGLYFHAYNKGKALVVSKVPLPNYRADLDERHGSTQQEIR
MSTETERRVGNLLDSSRDTRSADDSGVASNREATKQLPDVKITDSVSTTEEDSAKEKLSA
ELNKKQETLKASNSVKVMQSFREKLPAFKVKAEFLKAVNENQVLVVSGETGCGKTTQLPQ
FILEEEISSLRGADCNIICTQPRRISAISVAARISSERGESLGETVGYQIRLDSKCSAQT
RLLFCTTGVLLRQLVQDPDLNGVSHLLVDEIHERGMNEDFLLIILRDLLPRRPDLHLILM
SATINADLFSKYFGNAPTIHILGLTFPVAELFLEDVLQKTRYNIKSEFDNFQGNSRRRRK
ELDLKKDDLTVLFEDVNIESHYKNYSASTRHSLEAWSGSQIDLGLVEATIEHICRHEGDG
AILVFLTGWDDISKLLDKIKVNSFLGNLSKFLVLPLHGSMPAINQCEIFDHPPPNKRKIV
LATNIAESSITIDDVVYVVDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQP
GVCYRLYPKLIHDAMLEYQLPEILRTPLQELSLHIKRLQLGTVGSFLAKALQPPDPLSVQ
NAIELLKTIGALNDAEELTPLGNHLCSLPLDPNIGKMLLMGAIFQCLNPALTIAAALAHR
DPFVLPINRKEEADAAKRSFAGDSCSDHIALLKAFEGYKDAKRNGRERAFCWENFLSPVT
LQMMEDMRNQFIDLLSDIGFVDKSRGASAYNRYSHDLEMVCAILCAGLYPNVVQCKRKGK
RTAFYTKEVGKVDIHPASVNAGVHHFPLPYMVYSEKVKTTSIFIRDSTNISDYALLLFGG
NFIPSKTGEGIEMLGGYLHFSASKSVLDLIRKLRGELDKLLNRKVEEPGFDIPAEGKGVV
SAVVELLHSQNVRY
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgcgcttgctgagcgctaataataagcttactttgcctctttccaaacggctc
cctctcgcgtctgcgctgatctctccctttcctccactccagatttcctctttcgccatg
tcttatcgccctaactaccaaggcagccgtcgaggaggcggtcccaactccggacgcggg
ggcggacgtcgaggcggcggcggcggcggccgcggtggtcgtggcggtgagcagcgctgg
tgggacccggtttggcgagctgagcgactccgtcaaaaggcagccgagatggaagttctt
gatgaggttgaatggtgggataagatggatcaaatgaaaaaaggaggggagcaagagatg
atcattaaacgaaatttcagccgttccgaccagcaagttctttctgatatggcttaccaa
ttaggtctttacttccatgcatataataaagggaaggctcttgtggttagtaaagttcca
ttgccaaattatcgggcagatcttgatgaacgtcatggatctacacagcaagagattcgc
atgtctactgaaaccgagaggcgagttggaaatcttttggatagctcaagggacacaaga
tctgctgatgattctggtgtggcatccaatagggaagccacaaaacaattacctgatgta
aaaataactgattcagtttctactactgaagaggattctgccaaggaaaaactcagtgct
gaactcaataaaaagcaggaaacattgaaggcaagtaatagtgtgaaggtgatgcagtct
tttagagaaaaactacctgcattcaaagtgaaagctgagtttctgaaagctgttaatgaa
aatcaggttctagtggtttcaggagaaacgggctgtggtaaaacaacacagcttcctcaa
tttattttagaagaggagatatcatctttacgcggggctgattgtaacataatatgtact
cagccacgtcgtatttcagccatatctgtcgcagctagaatatcctcagaaaggggagag
agtcttggtgaaacagttggttatcagattcgcctagactcaaagtgctctgctcaaaca
cgactcttgttttgcacaactggagtgttactcagacagttggttcaggacccagattta
aatggtgtgagccatttgctagtggatgaaattcatgaaagaggcatgaatgaggacttt
ctgttaataattttgcgtgaccttcttcctcggcgtccggacttgcatcttatcttgatg
agcgcaaccatcaatgctgatttgttctccaaatatttcggaaatgcaccaactattcac
atactggggttgacttttccagtggcagagttatttctagaggatgtgctgcagaaaact
cgatataatattaaatcagagtttgacaactttcaaggcaattcacgaagaagaaggaaa
gagctggatttgaagaaagatgatttaactgtactgtttgaggatgtcaacattgagtct
cattataagaattacagtgcatctacgagacattcacttgaagcatggtcgggttcacag
attgatttgggtctggtggaggccacaattgaacatatttgccgccatgaaggtgatgga
gcaattcttgtattcctcacaggctgggatgacatttctaagctccttgacaagatcaaa
gtgaacagttttcttgggaatcttagcaagtttctggttcttcctctacatggttcgatg
cctgccattaatcaatgcgaaatatttgaccaccctccccctaacaagcgaaaaattgtt
ctggcgacaaatattgctgaaagtagcatcaccatagatgatgttgtgtatgttgtagac
tgtggaaaggcaaaggaaacaagttatgatgctcttaacaagctggcatgtctgttacca
tcatggatttcaaaggcttcagcacatcagagacggggtcgtgctggccgtgtgcaacct
ggagtttgctatagactgtatccaaaactaatccatgatgcaatgcttgagtatcaatta
cctgaaattcttcgaacacctttgcaagagctatcccttcatatcaaaaggttgcaactt
ggaaccgtgggatcatttttggcaaaggcacttcagccgccagatcctctttctgttcaa
aatgcgattgagcttcttaaaacaattggagctttgaatgatgcagaggagcttactccg
cttggtaaccatctttgctctctacctttggacccaaacataggaaagatgcttctaatg
ggagctatttttcaatgcctgaatccagctttgacaattgcagctgctcttgcacatcgt
gacccttttgtccttccaataaataggaaagaggaagctgatgcagcaaaaagatccttt
gctggtgattcttgcagtgaccatatagcacttcttaaagcttttgaaggatataaagat
gcaaaacgtaatggaagagagagagcattttgttgggaaaattttttatcgccagtgacc
ttgcagatgatggaggatatgagaaatcagtttattgacctgttatcagacataggcttt
gtagacaaatcacggggtgctagtgcttacaaccggtacagccatgatctggagatggta
tgtgccatcctttgtgctgggctttacccaaatgttgtgcaatgcaaaagaaagggaaag
cgtacagcattctatactaaagaagttggaaaagttgacattcatcctgcatctgttaat
gcaggggttcatcacttccctctgccttacatggtttacagtgaaaaggttaaaacaacc
agcatatttatccgagactcaacaaacatatctgattatgctttgcttctgtttggtggt
aattttattcctagcaaaacaggagagggtattgagatgcttggagggtaccttcatttt
tctgcatcaaagagtgtattagacttgatacggaaactgcgtggtgaacttgacaagctt
ttgaacagaaaggttgaagaaccaggatttgacattcctgcagaaggaaagggagtggtg
tctgctgtggttgaattattgcacagtcaaaatgttcggtactga
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