Durio zibethinus (durian): 111312499
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Entry
111312499 CDS
T05242
Name
(RefSeq) uncharacterized protein LOC111312499 isoform X1
KO
K06100
symplekin
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111312499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzi03021
]
111312499
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111312499
Transcription machinery [BR:
dzi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111312499
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
111312499
U7-dependent histone pre-mRNA processing factors
111312499
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CRM1_C
DUF7551
FEZ
Motif
Other DBs
NCBI-GeneID:
111312499
NCBI-ProteinID:
XP_022768541
UniProt:
A0A6P6AUQ0
LinkDB
All DBs
Position
Unknown
AA seq
1336 aa
AA seq
DB search
MVIVDSRDQALSLLTAANNHADLAVKLSSLKQAKDILSSLDSSFAADLFPYLADLQRSPY
SLVRKFLIEIIEDIALKAIDHCSILVPVLVAFLRDADSDVVRQSIACGRNFFCNVLEEMV
LQFQQHGKVDRWLEELWTWMVRFKEGVFSIALEPGPVGTKLLALKFLETYVLLFTADNVD
SEKFVEVTRGSGWTFNVSWLSGGHPILDPVALTTDANRTLFVLLDMLQSANSLPGCVTIT
VVYCLAAIARKRPLHYGTVLSSLLDFNANFETMRGLHNANIQYSLRTAFLGFLRCTYPAI
VESRDRLLRVLRAMNAGDAADQVIRQVEKMIKNSERSSRETQSGRDDQSSSQAYVLGDLS
KKRSMPQDNEELTNSFEIVSKRIRSGPNSHSMSPTQINDSGQDIASVNGLSPNLPLSDGN
LTPVEQMIAMIGALLAEGERGAESLEILISKIHPDLLADIVITNMRHLPKSPPSLTRLGA
LPITQQAIYVNSPTQAVPPPAPNSLHPPVSTAQLPFSSAATTSSSISNTSAANNSPADAK
RDPRRDPRRLDPRRAAVSVGVPSPPVLEEDTGTAMAEFDGSISSKPLSVPVVENPPVHSM
SNIRSDDKMVEGPMVSGVQQPAPEGDVLGGAEDIVPMLEVKASSNPALSPSHMVDEDSAE
MKADAKVKYETDASSFPESDQNFPASISISSLDETGQDLPVLPLYVELTEEQKRNVRKSA
VQQIAESYLHLHWSDGNQMHMALLARLVGQIDADDDIVVMLGKQIVVDYQQQKGHEIVLQ
VLYHLYSLTVSNSIDNSSYSAVLYEKFLLAVVKSLLEAFPASDKSVSRLLGEVPFLPDSA
LKLLDDLCYSDVFDVTGKEIRDAERVTQGLGVVWSLILGRPNNRQVCLGIALKCAVHSQD
DIRGKAIRLVANKLYQLSYISGEIEQFATNMLLSAVDQHAAGAVLLKSGSIDERDEREVG
SRDTSTSGSQLLEPRASEIDSMNTESTSNSASVVSFPEAQRLISLFFALCTKKPSLLQLS
FDIYGRAPKIVKQAFHRHIPIVIRALGQSYSQLLLIISDPPQGSENLLTLVLQILTQETT
PSPDLVATVKHLYETKLKDATILIPMLSSLSKNEVLPIFPRLVDLPLEKFQLALAHILQG
SAHTGPALTPAEVLVAIHDIIPEKGGPPLKKITDACSACFEQRTVFTQQVLAKALNQMVD
QIPLPLLFMRTVIQAIDAFPTLVDFVMEILSKLVSKQVWRMPKLWVGFLKCVAQTQPHSF
PVLLQLPPPQLESALNKYGSLRSSLAAYASQPTTKGSLPRSTLAVLGLANDSHMQQPHLS
TLHPTDNSSVQGATLT
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggtcattgtggattctagagaccaagccctttctctcctcaccgccgcgaataaccac
gccgatttggcggtgaagctgtcgtctcttaaacaggccaaggatattctttcctctctc
gattcatcttttgctgccgacctcttcccttacctcgctgacctccagcgttctccttac
agtctcgttagaaaatttcttatcgagataattgaagatattgcattaaaagcgatagat
cattgttctatactagtacctgtgttagtagcatttttgagggatgctgactccgatgtt
gtgcgtcaatctattgcttgtggcagaaatttcttctgtaacgttttggaagaaatggtg
ttacagtttcagcagcatggcaaagttgaccggtggcttgaagaactatggacgtggatg
gttaggttcaaggaaggcgtgttttccattgcattggagcctggtccggttgggacaaag
ttgctggcgctgaaatttttggagacatatgtcttactttttacagctgacaacgttgat
tctgaaaaatttgttgaagttaccagaggaagtggatggacttttaatgtatcatggcta
agtggtggtcatcctattttggatccagttgcgctaacaacagatgcaaacaggactctt
ttcgttttactggacatgttgcaatcagccaatagtctccctggctgtgtaacaatcact
gttgtctattgtctagctgccatagcaaggaagagacccctccactatggtactgttctg
tcttcactgctcgattttaatgcaaactttgagacaatgaggggattgcataatgccaat
attcagtattccttgagaactgcatttttgggattcctgagatgtacttatccagctatt
gtagagtcaagagacagattgcttagagttctacgagcaatgaatgctggggatgctgct
gatcaggtcatcagacaggttgaaaagatgataaaaaatagtgagcgttcttcacgggaa
actcagtcaggcagggatgatcaatcgtcaagccaagcatatgttttaggggacttgtca
aagaaaagatctatgcctcaggataatgaagaactaacaaatagtttcgagattgtgtcc
aagcgaattcgctctggtcccaattcccactcaatgtcacccactcaaataaatgattct
gggcaggatattgcttctgttaatggcctgtctcctaatctgcctctttcggatggtaat
ttaactcctgttgagcaaatgattgcaatgattggtgctttacttgctgaaggagaaaga
ggtgctgaatctcttgaaattcttatttcaaaaattcatcctgatctactggctgatatt
gtcatcacaaatatgaggcacttgcctaaaagtcctccttcattaacaaggcttggggca
ttgcctataactcaacaagccatttatgtaaatagtccaactcaagctgtgccacctcct
gctccaaattctctgcaccctcctgtttccacagcacaattgccctttagttcagctgcc
acaaccagctcatcaatatcgaatacatccgctgccaataattctcctgcagatgccaaa
cgtgacccaagaagggatccccgtcgcctagatccacgacgggctgctgtatctgttgga
gtgccatctccacctgttctggaggaggatactggcactgcaatggctgagtttgatggt
tctatttctagcaagcctctttcagtgccagttgttgaaaatcctcctgtgcattcaatg
tctaacatccgaagtgatgataagatggtagaaggtccaatggtttctggtgttcagcaa
ccagctcctgaaggggatgttctgggtggtgcggaagacattgttcccatgctagaggtc
aaggcttcttccaatcctgcactttctccatctcatatggttgatgaagattcagctgaa
atgaaggcagatgctaaggtgaaatatgagactgatgcatcatcttttccagagtctgat
cagaatttcccggcttctataagcatatcgtctttggatgaaactggtcaggatttacct
gtgttaccactatatgttgagctaactgaagagcagaaaagaaatgtgagaaaatcagca
gttcagcagatcgctgaatcatacctgcatcttcattggtcagacggtaaccaaatgcac
atggcattacttgctcggctggttggtcagattgatgctgatgatgacattgttgtcatg
ttgggaaaacaaattgttgtggattatcaacaacaaaagggtcacgagattgtattgcaa
gttctctaccatctatattctctcaccgtttcaaattccattgataactcttcatattct
gctgtgctttatgaaaaatttctcctggcagtggtcaaatctttgctggaagcttttcca
gcctcagacaagtcagttagcagacttcttggtgaagttccatttctgcctgactctgcg
ttgaaactgttagatgatctctgctattctgatgtgtttgatgttactgggaaagagatt
cgtgatgctgagcgtgtgacacagggccttggtgtggtgtggagtttaattttgggacgt
ccaaataatcgtcaagtctgcttaggtatagcattgaagtgtgccgttcattctcaagat
gacattcgaggcaaagctatccggctggtagcaaacaaactttatcagctgagctacata
tccggggaaattgagcaatttgcaacaaatatgttgctgtctgctgtggatcaacatgct
gcaggtgcagtgcttttaaagtctggatccattgatgaaagagacgaaagggaggttgga
agcagggacacatctactagtggctcccaacttttagagcccagagcttctgaaattgac
tccatgaatacagaatcaacaagtaatagtgcttcagtagtgtcttttcctgaagctcag
agactcatttctctgttttttgctttatgcacaaagaagcctagtcttcttcaactttca
tttgatatttatgggcgagcaccaaaaattgtaaagcaggcttttcatcgccatatccct
attgtaataagagccttaggtcagtcttattcccagttgctcctaataatatctgacccg
ccacaaggaagtgaaaatcttttgacactggtgctgcaaatactgactcaagagacaact
ccttctcctgatttagtagctactgtgaagcatttatatgaaactaagctgaaggatgct
accatccttattccaatgttatcatcgctttccaagaatgaggtgttacctattttccct
cggcttgttgaccttccattggaaaagttccagcttgcactggctcacatattacagggt
tcagctcatactggacctgccttgacccctgccgaagtgttggttgccatccatgacatc
attcctgaaaaaggtggccctccactcaaaaagataacagatgcttgctcagcttgtttt
gaacagcgcacggttttcacacagcaggtcttagcaaaggccttgaatcagatggttgat
cagatcccccttcctctacttttcatgagaacagttattcaggcaattgatgcttttcct
accctggttgattttgtcatggaaatcctatccaaacttgtgagtaaacaggtctggaga
atgccaaagttgtgggttgggttcttgaagtgtgtggctcagacacaaccacattctttt
cctgtattgttacagttacccccgccacagcttgaaagtgcactgaataaatatggtagt
ctcagaagttccctagctgcctatgcaagccaaccgaccacaaaaggttcactgcctagg
tcaacacttgctgttcttggtcttgcaaatgattcacatatgcagcaaccacatctgtca
accttgcatcctacagacaattcttcagttcagggagcaactctgacatga
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integrated database retrieval system
