KEGG   Durio zibethinus (durian): 111313789
Entry
111313789         CDS       T05242                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
dzi  Durio zibethinus (durian)
Brite
KEGG Orthology (KO) [BR:dzi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:dzi03009]
    111313789
Ribosome biogenesis [BR:dzi03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    111313789
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_SCAP NBCH_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IP5PC_F Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_VPS8 WD40_like Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 111313789
NCBI-ProteinID: XP_022770285
UniProt: A0A6P6AZS2
LinkDB
Position
Unknown
AA seq 479 aa
MFANYIYVYIYICVCQLFLLMEMGKNEEALVVCSDRSTGVGITIWDMKTGEQLLHIPTCA
AAPHGLLCLRNQFLVASQSNRHGSFGGGSIFIWPLNKPQSPLRSYTMEAIGPLSCTKDGL
YIAGGASSGNAYLWEVANGRLLRTWHAHNKSLKCMVFSDDDSLLICGSTDGIICVWSLIS
LLDVEDSGSSPPLLHYSSEHRSSITGLVTMSAGARSIFVSSSLDGTCKVWDLISGRLLQT
HVYPTSITAITHHPVEQLLFSGSVDGKIFVNMLDIGLVEDPLVTTEDQAFELKGHNGSIT
ALTFSGFGLISASEDFTFCLWDTINRVVIRRFNHKKGAVTNMVVINQSALFSMSNHRRVP
NQFRVSLLQKYPQPSNSGKGMVPFLSLSACLNKQTATNFQGNNLLHHLIFDSEREKTPAM
MQMKMEKSIDDRMLVTSMTKHVMEMNKHLQSRLLDMMQCRLLCPHETDSPPKKKRQTPD
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgtttgccaactatatatatgtatatatatacatttgtgtctgtcagttattcttattg
atggagatgggcaagaatgaagaggctttggtggtttgtagtgataggagtacgggagtt
gggataactatatgggacatgaaaaccggggagcaacttcttcatattcccacctgtgct
gctgctcctcatgggctgttgtgtttgaggaaccagttccttgttgcttctcaaagtaac
aggcatggttcatttggtggtgggtctatctttatttggcctttgaataagcctcaatca
ccactccgaagctacacaatggaggctattggccccctttcttgcacaaaggatggctta
tatattgcaggtggagcttcttctgggaatgcttatctttgggaggttgctaatggaaga
ttgctgagaacatggcatgctcataataagtctttgaagtgtatggtcttttctgacgat
gattcgcttcttatttgtggttctactgatggaatcatctgtgtttggtctttgattagt
ttgctagatgtggaagattctggaagttcacctcctttgctacattactcatcagaacac
agatcttccataactggtttagtgactatgtcagctggtgcacgttccattttcgtatca
agctctctggatggaacatgcaaggtttgggacctaatttcaggaaggcttttacaaact
catgtttatccaacatcaataacagcaatcactcatcatccggtagagcagctattgttt
tctggtagtgtagatggaaaaatatttgttaatatgcttgatatcggacttgttgaggat
cctctcgtcactactgaagatcaagcatttgagctaaaaggacacaatggatctataact
gcattgactttcagtggatttggtttgatatctgcatcggaggatttcaccttctgcctt
tgggatacaatcaacagggtggttatcagaagattcaaccataagaaaggtgcagtgact
aatatggtagtgattaatcagtctgcattgttttcgatgtcaaaccatcgaagagttccc
aatcagttccgtgtttctttgctccaaaagtatcctcagccttccaactcgggcaaggga
atggttccttttctctctttgtcagcttgcctcaacaaacaaactgcaactaatttccag
ggaaacaatttgctacaccacttaatatttgattcggagcgagaaaaaacacctgcaatg
atgcaaatgaaaatggagaaaagcatagacgatcgaatgttggttacaagcatgacaaag
catgtaatggagatgaataagcatttgcaatctcgtttgctggacatgatgcaatgcaga
ttgctatgccctcatgaaacagactcgcctccgaagaaaaagagacaaaccccagactga

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