Durio zibethinus (durian): 111314050
Help
Entry
111314050 CDS
T05242
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111314050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111314050
03009 Ribosome biogenesis [BR:
dzi03009
]
111314050
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111314050
Spliceosome [BR:
dzi03041
]
Complex A
U2 snRNP components
U2 related factors
111314050
Complex B
111314050
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
111314050
Ribosome biogenesis [BR:
dzi03009
]
Eukaryotic type
90S particles
Helicases
111314050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_22
AAA_19
ResIII
nSTAND3
SRP54
ABC_tran
Cas3-like_C_2
T2SSE
AAA_7
FtsK_SpoIIIE
AAA_30
Flavi_DEAD
AAA_SelU
TsaE
nSTAND_NTPase5
NACHT
Motif
Other DBs
NCBI-GeneID:
111314050
NCBI-ProteinID:
XP_022770772
UniProt:
A0A6P6B0R3
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MGTERKRKVSLFDVVDETSAKIGKSNGGGFAAMNVNSSINKWNGRPYSQRYYEILEKRKT
LPVWQQKEEFLQVLKANQTLILVGETGSGKTTQIPQFVLDAVDIETPDKRRKMMIACTQP
RRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLER
YKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVP
GRLHPVEIFYTQEPERDYLEAGIRTVVQIHMCEPSGDILVFLTGEEEIEDACRKITKEIG
NMGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPLKEDGPPGRKIVVSTNIAETSLTIDGI
VYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFNND
LQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDG
NLTKLGEIMSEFPLDPQMSKMLVVSSEFNCSNEILSIAAMLSVPNCFVRPREAQKAADEA
KARFGHIDGDHLTLLNVYHAYKQNDEDSSWCYENFINHRALKAADNVRQQLVRIMARFNL
KLCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEW
VIYNEYVLTSRNFIRTVTDIRGEWLVDVAPHYYDLENFPQCEAKRVLEKLYKKKEKDRED
SRNRR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgggtacggagaggaagaggaaggtgagcttgttcgatgtggtggatgagacatcggct
aagatcgggaaatcgaacggcggaggatttgcggcgatgaacgtcaacagctcgatcaac
aagtggaatggaaggccttattcgcaaaggtattacgagattttggagaagaggaaaacc
ctccctgtttggcaacagaaagaggagtttttgcaagtgttgaaagccaatcaaaccctt
atcttagtcggtgaaaccggtagcggtaaaaccactcagatacctcagtttgtattggac
gccgttgatatagaaactccggataagcgtaggaaaatgatgattgcctgtacccagccg
cgaagggttgctgcaatgtctgtttcgcggcgtgttgctgaagaaatggatgtaactatt
ggagaggaggttggttatagtattcgttttgaagattgcagcagtgcaagaactgtgtta
aagtacctaacagatgggatgcttttaagggaagctatgactgatcctcttttagaaagg
tataaagtaattattcttgatgaggcccatgaaagaactttggcgacggatgtgctattt
gggcttctgaaagaagtgttaaagaatcgacctgaccttaagcttgttgttatgagtgca
acgcttgaggctgaaaagtttcagggttatttttatggtgcaccacttatgaaggttcct
ggtaggctacaccctgtggagatattctatacccaggaacctgaaagagattacttggag
gctggaattcgtactgttgtgcagatacacatgtgcgagccttctggtgacatacttgtt
ttcctgactggagaggaggagatagaagatgcttgtcgcaaaataacaaaagaaattgga
aacatgggggatcaagtaggacctgttaaagtagtgcctttatattcaactcttccacca
gcaatgcagcaaaagatttttgaacctgctccacctcctttgaaggaggatggccctcct
ggaaggaagattgtggtgtcaaccaacattgctgaaacttccttgaccattgatggcatt
gtatatgttattgaccctgggttttctaaacaaaaagtttataacccacgagtgcgtgtt
gagtccttactggtatctccgatatcgaaggcaagtgcccaccaaagatctggacgtgct
ggaagaactcaacctggcaaatgtttcaggctctacactgagaagagttttaataatgat
ctgcagccgcagacttatcctgaaatattacgatcaaaccttgcaaatacagttctcacc
ttgaagaaactgggaattgatgatctggtgcatttcgactttatggatccgcctgctcca
gagacattgatgcgggcgttggaagtgttgaattacctgggagcattggatgatgatggg
aacttaacaaagttgggagagataatgagtgaatttcccttggatcctcaaatgtcaaag
atgctcgttgttagttccgagttcaactgttcaaatgagattctttcaattgctgccatg
ctttcagtacccaattgctttgtacggcctagggaggcacaaaaagctgcagatgaagct
aaagctaggtttgggcatattgatggtgatcatctcacacttttgaatgtttaccatgcc
tacaagcaaaacgatgaggattcgtcttggtgctatgagaattttatcaaccatagagcg
ctgaaggctgctgataatgttagacaacagctggtgcgcattatggccaggtttaacctc
aagctgtgcagcactgatttcaacagccgtgactactatgtcaacattagaaaggctatg
cttgctgggtatttcatgcaggtagctcatctggagcgcacaggacactacttgacagtt
aaagacaaccaagtggtgcacttgcatccatcaaattgcctcgatcacaagccagagtgg
gtcatctacaatgagtatgtcctgacaagccggaattttattcgcactgtgacagacatt
cgtggtgaatggttagttgatgtagcaccacattattacgatcttgaaaacttcccacag
tgcgaagccaagcgtgtccttgaaaagctttacaagaaaaaggaaaaggatcgcgaggac
agtaggaacagaagatga
DBGET
integrated database retrieval system
