Durio zibethinus (durian): 111314133
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Entry
111314133 CDS
T05242
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111314133
09123 Folding, sorting and degradation
03018 RNA degradation
111314133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111314133
03041 Spliceosome [BR:
dzi03041
]
111314133
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111314133
mRNA degradation factors
5'-3' decay
Lsm complex
111314133
Spliceosome [BR:
dzi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111314133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111314133
NCBI-ProteinID:
XP_022770923
UniProt:
A0A6P6B1B9
LinkDB
All DBs
Position
Unknown
AA seq
178 aa
AA seq
DB search
MKMTQADGSSLHVSFFGSSLGFYVFKKKKMLPLSLLKTAQGHPMLVELKNGETYNGHLVN
CDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEVIDKVQEETKSRADRRP
PGVGRGRGRGREDGPGGRLPKGVGRGLDDGAKGAGGGRGRGGSGGKTSGTRGGGRGRG
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgacacaagcagatggatcttcgttgcatgtttctttttttggttcttcgcta
ggtttctacgttttcaaaaaaaaaaaaatgcttcctctttctctacttaaaactgcgcag
ggccatcctatgctggtggaactgaaaaatggggagacttataatggacatttggtcaat
tgtgacacttggatgaacatccatctccgcgaggttatctgtacttcaaaggatggagac
aggttttggcgaatgcccgaatgctatatccgtggaaatacaatcaaatatcttcgagtt
cctgatgaggtaattgataaagttcaggaagaaacaaagagtcgtgcagatagaaggcct
cctggtgtaggccgtggcagaggtaggggtagagaagatggtcctggtggaaggctacca
aaaggagttgggcgtgggctagatgatggtgccaagggtgcaggtggaggccgaggcagg
ggtggttcaggtggaaagactagtggaaccagaggtggtggccgaggtcgaggttga
DBGET
integrated database retrieval system
