Durio zibethinus (durian): 111315434
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Entry
111315434 CDS
T05242
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5B-like
KO
K13174
THO complex subunit 5
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03013
Nucleocytoplasmic transport
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111315434
09122 Translation
03013 Nucleocytoplasmic transport
111315434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111315434
03041 Spliceosome [BR:
dzi03041
]
111315434
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111315434
Spliceosome [BR:
dzi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111315434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
111315434
NCBI-ProteinID:
XP_022772875
UniProt:
A0A6P6B754
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MEDGEIEEGMVVEESSHSPAPLRRPEKSPYDMLKESKASVEEIVAKILSXKKESKPKSQL
RELVTQMFLNFVTLRQANRSILLEEDKVKAKTERAKAPVDFTTLQLHNLMYEKSHYLKAI
KTCKDFKSKYPDIELVPEEQFFHDAPEAIKGSNLSDDSLHNLMLKRLNYELFQRKELCKL
LERLEQQKKSLLEIIANRKKFMSSLPSHLKSLKKASLPVQNQLGVLHSKKLKQHHSAELL
PPPLYVIYSQFMAQQEAFGEDINLEIVGSMKDAQAFARQHANKDNGLSTSVESSRLEDDV
PDEEDDGQQRRKRPKRAPSKEAIDQAGVYQVYPLKIILHIYDDEASDPRSTKLITLKFEY
LLKLNVVCAGIEGSTEGPEYNILCNLFPDDTGLDLPHQSAKLFVGDAATFDEKRTSRPYK
WAQHLAGIDFLPEVSPLLNSHETSNNETKSNAFISGLASYRQQNRVQTVVQRIRSRKKAE
LALVEQLESFMKLKWPSLNCKSVPWALHTPLCSLHSWSSVASKVNEASSQLVTDAEPVQE
PMDVDMNGRSGMSKEELESLREDGELPSLLSFPSVTNDAKLTPLKGSSLNHPKQLALISK
SFLSLVSKGKSPSFKKHDDGSDFILETDSDLDEPTETETENSASTQCYEIAEKSWVDYGI
KEFILLLTRRMDTSGRSMKLEAKVKISMEYPLRPPLFTVNLYSSPGENSSENHYSKWHNE
VRAMEAEVNLHMLKMVPPDEENYTLSHQVYYLAMLXDYYMDEATSSSEKRKSSSVIDIGL
CKPVSGRLFSRSFRGRDRRKMISWKDMECTTGYPF
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggagagatagaggagggaatggtggtggaagagagctcgcactcaccagct
ccgctgcgtaggcctgagaaatctccttacgatatgcttaaagaaagcaaagcatcggtc
gaagagatcgtcgccaaaatcctctccnacaaaaaggaaagcaaaccaaaatcccaactc
agagaactcgtcacccaaatgtttctcaactttgtcactctcagacaggcgaatcgtagt
atattattggaggaggacaaagtgaaagccaagacggaacgagcgaaggcgccggtggat
tttacgacgctgcagcttcacaatttaatgtacgagaagagtcactatttgaaagctata
aaaacttgcaaggatttcaaatctaagtatcctgatatcgagcttgtaccggaggagcag
ttttttcacgacgcccctgaagcaatcaagggttcgaatttgtctgatgatagcttgcat
aatttgatgcttaaaaggcttaattatgagctcttccagcggaaagagctatgcaaactt
ctagaaaggttggaacaacaaaagaaaagtcttttggagataatagcaaatcggaagaag
tttatgtcgagcctgccttcacacctcaagtcccttaagaaagcatcattgccagtacag
aatcaattgggtgttttgcattcaaagaaactgaagcaacatcattcagccgaattgctt
ccacctccactctacgtgatttactctcagttcatggcccagcaggaagcgtttggtgaa
gatatcaatctggagattgtaggaagtatgaaggatgctcaagctttcgctcgccagcat
gcaaataaggacaatggtttatctactagtgtagagagctcaaggttggaggatgatgta
cccgatgaggaagatgatggccagcagaggagaaagcgaccaaagagggctccaagcaag
gaggctattgaccaggcaggagtctatcaagtttatcctctgaaaattatccttcacata
tacgatgatgaggcatctgatcctagatccacaaaacttatcactctgaagtttgagtac
ttgttaaagttgaatgttgtttgtgctgggattgaagggtcaactgaaggacctgagtat
aatatcctttgcaatttatttcctgatgacactggccttgatctgcctcaccagtcagcc
aagctcttcgttggtgatgctgctacatttgatgaaaagagaacttcacgtccatacaag
tgggcccagcatttggcaggaattgatttcttacctgaggtttcaccattgcttaatagc
catgaaacttcaaataatgaaaccaaaagcaatgcttttatttctggtcttgcttcttat
cgccagcagaatcgagtgcagacagttgtgcaaagaatccgctcacggaaaaaagctgag
ctggctcttgtggaacagcttgaatcatttatgaagcttaaatggccttctctgaattgt
aaaagtgttccgtgggccttgcatacccctttatgcagtttacatagttggtcatctgta
gcatccaaagtcaatgaggcttcatctcaacttgttactgacgcagaaccagtccaagaa
cctatggatgttgatatgaatggaagatctggtatgtcgaaggaagagctggagagttta
agggaagatggggagctgccatctttgctttcatttccatctgtcacaaatgatgctaaa
cttactccattaaagggatctagtcttaaccatcccaagcagttggctttgatttcaaaa
agctttttgtccctagtcagtaagggaaaatcaccaagtttcaaaaaacatgatgatggt
tctgacttcattctggagactgatagtgatctggatgagcccacagagacagagactgaa
aactctgcttctactcaatgctatgaaatagctgaaaagtcatgggtggactatggtatc
aaggaatttattcttcttttaactaggagaatggacacaagtgggaggagtatgaaacta
gaagccaaggttaaaatcagtatggaataccctcttagacctcctctgtttacagtgaat
ctttattcttctcctggagaaaattcttctgagaatcactattctaagtggcataatgaa
gtccgtgctatggaggctgaagtaaatcttcatatgttaaagatggtacctccagatgaa
gaaaactatacattatcacatcaagtgtactatcttgctatgctgnttgactattacatg
gatgaggcaacttcatcttctgaaaagaggaagagtagttctgtgattgatattggcttg
tgtaaacctgttagtggtagacttttctctagatcattcagagggagggatcgtaggaaa
atgatatcttggaaggacatggaatgcaccactggctaccctttttag
DBGET
integrated database retrieval system
