Durio zibethinus (durian): 111315464
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Entry
111315464 CDS
T05242
Name
(RefSeq) DNA excision repair protein ERCC-8-like isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03420
Nucleotide excision repair
dzi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111315464
09124 Replication and repair
03420 Nucleotide excision repair
111315464
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dzi04121
]
111315464
03400 DNA repair and recombination proteins [BR:
dzi03400
]
111315464
Ubiquitin system [BR:
dzi04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
111315464
DNA repair and recombination proteins [BR:
dzi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
111315464
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Nup160
Motif
Other DBs
NCBI-GeneID:
111315464
NCBI-ProteinID:
XP_022772918
UniProt:
A0A6P6B6V3
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MWKEIRDREAGKIRPKSFSSRIKFNRISNLQLTNYKDIVSSHRGSINSLQVDLTEGRYLL
SGASDASAAIYDIQRATNYEGNGLIAKHKSIVSVDKQHEKGHKYAISSAIWYPVDTGLFI
TGSYDHNIKVWDTNTTKVVMNFKMPGKVYRTAMSTLATSHMLIAAGTEDVQVRLCDIASG
AFAHTLSGHRDGVMTVEWSTSSEWVLITGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRP
PVLDHSAANKVSVSKPLSTGQSSLVKSRAPQKKYTNGHGIKQSTIGRMPAKGSARQRLHP
GMLSIQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIKLWDLESGYNTLVNFEKARLQTS
KAIQLAISQDSAHVFVPCMTVVKFTGSGTIHRRQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaggaaattagagatagagaagcgggtaaaatccgcccgaagtccttttcaagt
cggatcaaattcaatcggatttccaatctccaactaaccaattacaaagacatcgtttct
tctcacagaggctccatcaactcccttcaggtggatttgactgagggaagatatttgttg
tcgggtgcatctgatgcatcagctgctatttatgacattcaaagggcaactaattatgaa
ggaaatggtttaattgccaaacataaatctatagtttcggtcgataagcaacacgaaaag
ggacataaatatgccatttcatcggccatttggtatcctgttgacacgggactattcata
acgggttcttatgatcataatatcaaagtttgggacacgaatacgactaaggtggtgatg
aactttaaaatgcccggaaaggtttataggactgctatgtctacattggcaacatctcat
atgttaattgctgctggaactgaagacgtgcaagttcgcctttgtgatattgcttcgggg
gcatttgctcatactttgtctggccaccgtgatggcgtgatgacagtggaatggtctact
tccagtgagtgggtcttgataacaggtgggtgtgacggtgcaattcgtttttgggacatt
agacgtgctggatgttttcttgttttggatcagtcccagtctcagcttggaagacgtcca
cctgtcttggatcattcagctgcaaataaggtttcagtctcaaagccactgtcaactggc
cagagctcgttggtaaaatcacgagcgccacaaaagaaatataccaacgggcatggcata
aagcagtcaaccattggtcgaatgccagctaaaggttctgcaaggcaaagactacaccct
gggatgctgtccattcaggatcgtgccactgctcattatggtgctgttactggtttgaaa
gtaaccgaagatggcatgtaccttctaagtgcaggttctgattcaagaataaagttgtgg
gatcttgaatctggttacaatacccttgtaaactttgaaaaggcacgcctacaaacaagc
aaggcaatccagttagccatatctcaagattcagctcatgtttttgtcccatgcatgaca
gtcgtgaaattcacaggatcaggaactatacacaggcggcagtga
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