Durio zibethinus (durian): 111315470
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Entry
111315470 CDS
T05242
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111315470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111315470
Spliceosome [BR:
dzi03041
]
Complex A
U1 snRNP components
U1 related factors
111315470
Complex B
111315470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Motif
Other DBs
NCBI-GeneID:
111315470
NCBI-ProteinID:
XP_022772927
UniProt:
A0A6P6B6X5
LinkDB
All DBs
Position
Unknown
AA seq
1036 aa
AA seq
DB search
MANNPQPSSAQPHWPPAVGSLGPQSYGSPISSQFRPVVPAQQGQHFVPAASQQFRPVGQV
PSLNVGMPAVQNQQMQFSQPMQQFPPRPNQPGLSTPSAQPIQVPYGPNMPLTSESPQSHQ
IAPSLNSHVPGLGAPGMPPASSYSFAPSFGQPQNNVSASSQFHPISQVHAPVGPVAGQPW
LPTGNQSVSLPTPIQQTGQQPSLISSSDTAANVPSLTLQSSSDWQEHTSADGRRYYYNKK
TRQSSWEKPLELMTAIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLAREQA
QVAASQGTPSDSGVASQPPVSGAVSAAETPTAAIPVSSNTLQASSPVSVTPVAAVANPSP
TLESGSTFVPVSQSAATSASGVQLPVVSATPLPAVASGGSTVSVTLVNANTTTIRSLEST
ASQDTVHFADGASAQDIEEAKKGMATAGQVNVTPVEEKVLDDEPLVYANKLEAKNAFKSL
LESANVQSDWTWEQAMREIINDKRYGALKTLGERKQAFNEYLGQRKKLEAEERRMRQKKA
REEFLKMLEESKELTSSMRWSKAQSLFENDERFKAVERARDREDLFENYIVDLERKEREN
AAEEKRRNIAEYRKFLESCNFIKANSQWRKVQDRLEDDERCSRLEKIDRLLIFQDYIHEL
EKEEEEKKKMQKEQLRRAERKNRDAFRKLMEEHVADGILTAKTYWRDYCLKVKDCTQYLA
VASNTSGSTPKDLFEDVTEELEKQYHEDKTRIKDAMKLRKVTMVSTWTVEDFKAAISEDV
GSLPISDINLKLVYEELLERAKEKEEKEAKKRQRLADDFTKLLHTYKEITASSNWEDSKP
LFEESQEYRSIVEESFRREIFEEYIAHLQEKAKEKERKREEEKAKKEKERDEKEKRKEKE
KEKEKERKEKEREREREKGKERTKKDETDSENLDISDSYGHKEDKKKEKEKDRKHRKRHQ
SAADDGSSDKDDRVESKKSRRHGSDRKKSRKHAHSPETDSENRHKKHKRDHRDGSRRNSG
YEELEDGELGEDGEIQ
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaatcctcaaccctctagtgcccagccacattggccgccagcagttggatcc
ttgggtcctcaaagttatggttctcccatatcgtcacagtttcgaccggtggtcccagca
cagcaaggacagcactttgttccagctgcttcccaacagtttcggcctgttgggcaggtt
ccctctttaaatgttgggatgccagctgttcaaaatcagcagatgcagttttctcagcca
atgcagcagtttccaccccggccaaatcaacctggtctttctacaccttcagcacagcct
atacaagtaccatatggtccaaacatgcctcttacatctgaatcaccacagtcacatcaa
attgctccctctttgaatagtcatgtgccaggcttaggggcccctggaatgccccccgct
tcatcatatagttttgcaccatcttttggccagccacagaacaatgtcagtgcatcttca
cagtttcaccctatatctcaagtgcatgcacctgttggcccggttgctggacaaccttgg
ttgccaactggaaatcaaagtgtttcacttcctacaccaatacagcagacaggccaacaa
ccttcactcatttcttcttctgatacagctgccaatgttcctagccttacactgcaatcg
tcttctgattggcaagagcatacatctgctgatggaagaagatattattacaacaaaaag
acgaggcaatctagttgggaaaagcctctggaactgatgacagcaatagagagagctgat
gcatccacagtttggaaggaatttacaactccagagggaagaaagtattattacaacaaa
gttacaaagcaatctaagtggacaatacctgaggaattgaagttagctcgtgagcaagct
caggtagcagctagccaaggaaccccatcagattcaggagtggcttctcaacctccagtt
tctggtgctgtctctgcagctgagacgcctactgcagctattcctgtgagctccaacact
ttgcaggcttcaagtccagtttcagttacgcctgttgctgctgttgctaatccttcccct
actttagaatctggatcaacatttgttcctgtttcacaatctgctgcaacgagtgcatct
ggggttcaactccctgtggtgtctgcgactcctttacctgctgttgcctctggaggatcc
actgtttctgttactttggtcaatgctaacacaacaaccataaggagcttagaaagtaca
gcgtctcaagacactgtgcattttgcagatggagcttctgctcaggacattgaggaagca
aaaaaagggatggcaacggctggacaagttaatgtgactccggtggaagagaaagttctg
gatgatgagcctttagtatatgcaaataagctggaggcaaaaaatgctttcaaatccctt
cttgaatctgcaaatgtgcaatctgattggacttgggagcaggcaatgagagaaataatt
aatgacaaaaggtatggtgctctgaaaacacttggtgagcggaagcaagcctttaatgag
tatttgggtcaaaggaaaaagctagaggctgaggaaaggcgcatgagacagaagaaagct
cgcgaagagtttttaaagatgctggaagagtccaaagaactcacatcatccatgagatgg
agcaaagctcaaagtttgtttgaaaatgatgagaggttcaaggctgttgaacgagccaga
gaccgagaagatctttttgaaaactacatagtggatcttgagaggaaggaaagggaaaat
gctgcagaggaaaaaaggcgaaatatagcagaatacaggaaatttttggaatcctgtaat
tttattaaggcaaacagccagtggcgaaaagttcaggatcgcttagaggatgatgaaaga
tgctcacgtcttgaaaaaattgaccgcttgctcatatttcaggactacattcatgaatta
gagaaggaagaggaggaaaaaaagaagatgcaaaaggaacaactgagacgtgctgagcgc
aaaaaccgtgatgcatttcgaaagctaatggaagaacatgttgctgatggcattcttacg
gctaaaacttactggcgagattattgtttgaaggtgaaagattgcactcaatatttagct
gttgcatctaatacatctggttcaacaccaaaagatttgtttgaggatgttactgaagaa
ttagaaaaacagtatcatgaagacaaaacccgtataaaagacgcaatgaagttaaggaag
gttaccatggtttccacgtggacagttgaagacttcaaggctgctatttcagaagatgtt
ggttccttgccgatatcagatataaacttaaagcttgtgtatgaggagttactcgagaga
gccaaggagaaggaagagaaagaggctaaaaaacgtcagcgtctggctgatgacttcact
aagctattacatacatataaggagataactgcatcttctaattgggaggattctaagcca
ctttttgaagaaagccaagaatacagatcaattgtggaagagagctttaggagagagatc
tttgaggaatacattgcacacttacaggagaaggctaaagaaaaggagcgcaaacgtgag
gaggaaaaggctaaaaaggagaaagagagagacgagaaagagaaacgaaaggagaaggag
aaggagaaggagaaggagagaaaggagaaggaaagagaacgtgaaagggagaaaggtaag
gaacgaactaaaaaggatgagacagatagtgagaatttagatatatctgacagttatggc
cataaagaggacaagaaaaaggagaaggaaaaagataggaaacaccgtaaacgacatcaa
agtgctgctgatgatggtagttctgacaaggatgacagagtggagtcgaagaagtctcgt
agacatggcagtgatcgtaagaaatcaagaaagcatgcacactcacctgaaactgacagt
gaaaaccggcataaaaagcacaaaagagatcaccgtgatgggtcgcgtagaaacagtggt
tatgaggagttggaagatggtgaacttggtgaggatggtgaaatccagtag
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integrated database retrieval system
