Durio zibethinus (durian): 111316986
Help
Entry
111316986 CDS
T05242
Name
(RefSeq) ATP-dependent RNA helicase DEAH11, chloroplastic-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111316986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dzi03041
]
111316986
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111316986
Spliceosome [BR:
dzi03041
]
Complex C
Other components
Step II factors
111316986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RBD_DEAH11
KH_DEAH11_2nd
RRM_DEAH11
KH_DEAH11_1st
KH_DEAH11
Helicase_C
OB_NTP_bind
IBR
DEAD
AAA_22
AAA_19
IBR_1
HA2_N
ResIII
ABC_tran
AAA_29
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
111316986
NCBI-ProteinID:
XP_022775002
UniProt:
A0A6P6BD17
LinkDB
All DBs
Position
Unknown
AA seq
1759 aa
AA seq
DB search
MKNFSASSNHRQPPPLGGHKPCQQRHHSYQNDHHQRPDFRSVNNQYQRRSYPPPAPNDVG
STNSNILQRPNFIIQLLPDFSSPSSFPSKPNDLQTLISQLKPSPESFLIHTTGKIAASLC
FREWTQTLSAILSLWSSRLDGSYHYTPNLISSFLVPSDTVELIQNLKTLFSNHIKGLMEG
ELVKKWQKRIEEKSDEIADVSGQMGKRHYPMGRFFDLNEKKKASMAERSMISKRLKEFKG
GMRSLLRCLEDGEIGNEEEEEALEVFRVVGEFDWKRIHKLILREFRRLEDGLPIYAHRQE
ILTRIHGEQIMVLIGETGSGKSTQLVQFLADSGIAAHESIVCTQPRKIAAISLAERVREE
SIGCYDDNSVICYPAFSSAQQFDSKVIYMTDHCLLQHYMNDRNLSGISCIIVDEAHERSL
NTDLLLALIKDLLVQRLDLRLIIMSATANANQLSDYFFGCGIFHVMGRNFPVDIRYVPCA
TEGTSGSCTVASYVSDVIRMVAEVHKAEKLGNILAFLTSQLEVEWACDNFEAPNAVVLPL
HGKLSFEEQYRVFQNYPGKRKIVFATNIAETSLTIPGIKYVIDSGMVKESKFEPGTGMNV
LKVCWISQSSANQRAGRAGRTEPGRCYRLYTASDFESMPPNQEPEIRRVHLGVAVLRILA
LGIKNVQSFDFVDAPTSKAIDMAARNLIQLGAIVENNGVFELTDDGRYLVKLGIEPRLGK
LILSCFHCGLRREGLVLAAVMANATSIFCRVGNEDDKVKADCLKVKFCHRNGDLFTLLSV
YKEWEALPYNRKNKWCWENSINAKSMWRCQDTVTELEICLQKELAVITPSYWLWDPHEST
ERDKILKVSILSSLAENVAMYSGYDPLGYQVALTEQHVKLHPSCSLLIFGQKPSWVVFGE
LLSITKQYLVCVTAFDFESLATLHPSPLFDAFKMESKRLQVKAMTGFGSTLLKKFCGKSN
HNLRSLLSRIRTACMDERIGVEVNIDQNEILLFASSMDMQKVLAFVNEVLECERKWLLNE
CMEKPLFHGQSASPSMALFGAGAEIKHLEVDKRCLTVDIFHSDVNALEDKELLIFFEKYS
NGIICSVHKSQANGQESDDKEKWGKITFLTPDAARKAAELDGVDFAGSALKVLPSVTSFG
GDQKMFTFPAVNAKVCWPHRQSKGFGVVKCDRLDVGFIIDDFSNLVIGGKRIRCDVGMKS
GDAVMIYGIDKELSEAEIWDSLQRATKRKIHDFFLVRGDAVENPTCGACEEALRREISPF
MPKRNPHTYCCQVQVFQPEPKKTFMKALITFDGRLHLEAARALEQLEGKVLPGCLSWQKI
RCQQLFHSSISCSSSVYAVIKKQLDSLLASFRHLKGVDCYLKANENGSYRLRISANATKT
VAELRRPVEELMNGRTIKHSSLTPSILQHLFSRDGSNLMRSLERETRTYIFFDKHSLNVR
VFGSPDDIAVAQQKLIQSLLSYHESKQLEVQLRGQRLPPDLMKEVVKKFGPDLHGLKEKI
PGAEFTLSTRHHIISIRGDKEMKRKLEEIVLEIAETGKDFAERSDSEVTCPICLCEVEDG
YQLEGCSHFFCRLCLVEQCESAIKNLDSFPICCAHQGCKVPILLTDLKSLLSTEKLEELF
RASLGAFVACSGGTYRFCPSPDCPSVYRVADHETFGELFVCGACYAETCTRCHLEYHPYL
SCEKYREFKEDPDSSLKEWCKGKEQVKACPVCGYIIEKIDGCNHVECKCGRHVCWVCLEF
FSSSDDCYDHLRAVHMTII
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttctctgcatcctccaaccaccgccaacccccgccacttggtggccataaa
ccttgccagcagcgccaccatagctaccaaaacgatcaccatcaaagacccgattttcgg
tcagttaataaccaataccaacgccgcagctacccaccgccagcacccaacgacgttggt
tccaccaattccaacatcctccaacgcccaaacttcataattcaactccttcccgacttt
tcctccccctcctccttcccctccaaacccaacgacctccaaactctaatttctcaactc
aaaccatcccctgaaagtttcctgattcacaccactggaaaaatcgcggcttccctgtgt
tttcgggaatggacccaaaccctctctgcaattctttctctctggagttcccgccttgat
gggtcctaccactatactcccaaccttatttccagcttcctcgttccttctgacacggtg
gaactcatacaaaaccttaaaacccttttctcaaaccatataaagggattgatggaaggg
gaattggttaagaaatggcagaaaagaatcgaggaaaaatccgatgagattgctgacgtg
tcaggacaaatgggtaagaggcattatccgatgggaaggttttttgacttgaatgaaaag
aagaaagcttcgatggctgagagatccatgatttcgaagcggttgaaggagtttaagggg
gggatgaggagtttgctgcggtgtttggaagatggggaaattgggaatgaggaagaagag
gaagctttggaagttttcagggttgttggagagtttgattggaagagaattcataagttg
attttgagggaatttaggaggttggaagatggtttgcctatatatgctcataggcaagag
attctcactagaatacatggtgaacagataatggtgttgattggagagactggttcaggg
aagagtacacagctggttcagtttcttgctgattcaggaattgccgctcatgaatcaatt
gtatgtactcagccacgtaagattgctgctatctccttagcagaaagagtcagagaagaa
agcattgggtgttacgatgataattcagtcatttgttatccagcattctcatctgctcag
cagtttgattcaaaggtaatatatatgactgaccactgtttactgcagcattatatgaat
gataggaatttgtctggaatttcatgcatcattgttgatgaggcccatgaaagaagtttg
aacaccgatcttcttttggcattgattaaagatttacttgttcaaagacttgatttaagg
ctcataataatgtctgcgacggctaatgcaaatcaactatctgactacttttttggttgt
ggaatctttcatgtgatggggagaaactttcctgttgatattagatatgttccttgtgca
acagagggaacttctggttcttgtacggttgcttcatatgtttctgatgttataaggatg
gttgctgaagttcataaagctgagaaattggggaatattcttgcctttttgacttcccag
ttggaagtagaatgggcttgtgataattttgaagctccaaatgcagttgtgttaccgttg
catggaaagctatcatttgaagagcaatatcgtgttttccagaactaccctgggaaaaga
aaaattgtatttgcaacaaatattgcagagacatcactcacaattcctgggatcaagtat
gtgattgattctggtatggttaaggagagtaaatttgaacctggtactggaatgaatgtt
ctcaaagtgtgctggatcagccagagttctgctaatcaacgggctggtcgtgctgggagg
acagaaccaggaagatgctatcgactatacacagcgagtgattttgagtcaatgcctcct
aatcaggagcctgagattcgcagagttcatctcggtgttgccgttctgaggatccttgct
ttgggaatcaagaatgttcagagttttgattttgttgatgcacctacttctaaagcgatt
gacatggcagctaggaatcttatccagttgggagccattgtggaaaataatggcgttttt
gagttaactgatgacggacggtacttggtaaaattggggattgagcctcgtcttggtaaa
ctaattctcagttgctttcattgtggtctgcgtagagagggccttgttcttgctgctgtt
atggcaaatgccactagcatattttgcagggtgggtaatgaggatgataaggttaaagct
gattgtcttaaggtgaaattttgccaccggaatggtgatctctttactctgctttctgtg
tataaagaatgggaagctctcccctataacaggaaaaataaatggtgctgggaaaacagt
ataaatgctaaatcaatgtggagatgccaggacacagtaactgaattggaaatttgtctg
caaaaggaacttgctgttattactccaagttactggttatgggatcctcatgagtctact
gagcgtgataaaattttgaaggtgagcatactttcttcccttgccgaaaatgtagccatg
tattctggatatgatccacttggttatcaagtggcattgactgaacaacatgttaagctg
catccatcatgttcattgctgatatttggtcagaagcctagttgggttgtttttggtgaa
ctcttatcaataactaagcagtatttggtctgtgtaactgcttttgattttgaatcttta
gccactctccatccttcgcccctgtttgatgcattcaagatggaaagcaagaggttgcaa
gtgaaggcgatgactggttttggtagtactttactgaaaaaattttgtgggaaatctaac
cataatcttcgatctcttttatcacggattaggactgcctgtatggatgaacgtattggt
gttgaggtcaatattgaccagaatgagattctgctatttgcctcatccatggacatgcag
aaggttctggcctttgtaaatgaggtgctggaatgtgaaaggaaatggttgcttaatgaa
tgcatggagaaacctttatttcatggacagagtgcctcaccatctatggcactttttgga
gcaggtgctgagattaagcatcttgaagttgataagagatgtttgactgttgatatattc
cattcagatgttaatgcccttgaagataaggagcttttgattttcttcgagaaatattct
aatggcattatttgttctgtccacaaatctcaagccaatgggcaggagagtgatgacaag
gaaaaatggggcaagataacgttcctaactcctgatgctgccaggaaagctgctgagttg
gatggagttgactttgctggctctgcactgaaggtacttccttcagtgacatcctttgga
ggtgatcagaagatgttcacattccctgctgtcaatgcaaaagtttgttggcctcatagg
cagagtaaagggtttggagttgttaaatgtgatcggcttgatgttggtttcattattgat
gatttctctaatctggtaataggaggaaaacgtattcggtgtgatgttggcatgaaatct
ggtgatgctgtaatgatatatggaattgataaagagctttctgaagctgaaatttgggat
tcactacagcgggcaacaaaaaggaaaatccatgattttttcctggtgagaggagatgct
gtggaaaatccaacatgtggtgcttgtgaagaggcactccggagagaaatatcccctttt
atgcctaaaaggaatccccatacatattgttgccaggttcaggttttccagcctgaacca
aagaagactttcatgaaagccttgataacctttgatggaagattacatttggaagctgca
agagctttagagcagctagaggggaaagtattacctggatgtctgtcatggcagaagata
agatgccagcaactgtttcatagttctatatcctgctcttcatctgtatatgctgttatt
aagaagcaactggattctttgctagcaagcttcagacatctaaaaggtgtagattgctat
ctaaaggcaaatgaaaatggttcctatcggctgagaatatctgccaatgccacaaaaact
gtggcagagctgagaaggccggtggaagagctaatgaatgggaggaccataaaacattcc
agcctcactccttccatactacagcatctgttttctagagatggcagtaatctgatgaga
tcattggagcgagagacaagaacctatattttttttgacaagcatagtctcaatgtaaga
gtctttggctctccggatgatattgccgtagcccagcaaaaattgattcaatcccttttg
tcctaccacgagagcaagcagcttgaggtccaacttcgtggtcagcgtctgcctcctgac
ctgatgaaggaagtggttaaaaaatttgggccagaccttcacgggctcaaagagaagata
cctggggctgagtttactcttagcactaggcatcatattatttccattcgtggtgacaaa
gagatgaagcgaaagttagaagagattgttcttgagattgcagagacaggcaaagatttt
gccgagagatctgatagtgaagttacctgccccatttgcttgtgtgaagtagaagatggc
taccagcttgaaggctgttcccatttcttctgtcgtttgtgtttggtggagcaatgtgaa
tctgccataaaaaacttggatagctttccaatatgctgtgcccatcaaggttgtaaagtt
cccatattgcttactgatttgaagtctctcctgtcaactgagaagttagaggaactcttt
agggcttctttaggggcatttgttgcatgcagtggaggtacttatagattttgcccttct
cctgattgcccctcagtttatcgtgttgctgatcatgagacttttggcgagctatttgtg
tgtggagcatgttatgcagagacttgtactaggtgccacctggagtatcatccatatctt
tcgtgtgagaagtaccgggagttcaaggaagatccagattcatctttgaaagagtggtgc
aaaggaaaggagcaggtgaaagcttgcccagtatgtgggtatatcattgagaagatcgat
gggtgtaaccacgtagaatgtaagtgcgggaggcatgtttgctgggtctgtttagagttc
tttagtagcagtgatgattgttatgaccatttgagggctgttcacatgaccatcatctga
DBGET
integrated database retrieval system
