Durio zibethinus (durian): 111317097
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Entry
111317097 CDS
T05242
Name
(RefSeq) polyadenylate-binding protein 2-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03015
mRNA surveillance pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111317097
09123 Folding, sorting and degradation
03018 RNA degradation
111317097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111317097
03041 Spliceosome [BR:
dzi03041
]
111317097
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111317097
mRNA cycle factors
Stress granule specific factors
111317097
Spliceosome [BR:
dzi03041
]
Complex C
Other components
Complex C specific factors
111317097
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_5
RRM_occluded
RRM_3
RRM_7
RRM_Nup35
RRM_RdRP1_2
SET_assoc
RBD_DGKtheta
Motif
Other DBs
NCBI-GeneID:
111317097
NCBI-ProteinID:
XP_022775170
UniProt:
A0A6P6BDK8
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MEVMAQVQMQTQAAPVAVTSSSLPPQQQQVVNGVASNGVSVTTSLYVGDLDLAVTESQLY
DFFSQVGAVVSVRVCKDLTTRRSLGYGYVNYSNSHEAARALDVLNFTPLNGKPIRIMYSN
RDPTVRKSGAGNIFIKNLDKTIDNKALHDTFSTFGNILSCKIATDHSGQSKGYGFVQFDN
EESAKNAIDKLNGMLLNDKQVFVGPFLRKQERESAVDKVKFNNVYVKNLSESTTDEDLKN
VFGDYGPITSAVIMRDAEGKSKCFGFVNFENPDDAARSVDSLNGKKFDDKEWYVGKAQKK
SEREMELKGRYEQTLKETADKFEGLNLYVKNLDDSINDDKLRELFSEFGTITSCKVMCDP
NGISRGSGFIAFSTAEEASRALMEMNGKMVVRKPLYVALAQRKEERRARLQAQFSQMRPG
AMGPAVGPRMPLYPPGAPGLGQQLFFGQGPPAIIPPQPGFGYQQQLVPGMRPNFFMPMVQ
PGQQNQRPGGRRSGAGLMQQPQQPLPFLQARMLPKGHVYRYPPGRNMPDVPIPGVPGGML
PVPYDMGGIPFRDAAFSQPMATGALASALANATPEQQRTLLGENLYPLVDQLEHDNAAKV
TGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRNVGPQQPQANSATDRLASLSLNDNLV
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcatggcgcaggttcaaatgcaaactcaggcggctccggtggcggtgacgtcg
tcgtcgctgccgccacagcagcagcaggttgtgaatggggtggcgagtaatggtgtgagt
gtgactacgtcgttgtatgttggggatcttgatctggctgtgacggaatctcagctttat
gatttctttagccaagtgggagcagtggtttcggttagggtttgcaaagacttgactacc
cgtcgctctcttggttatggttatgttaattacagcaacagccatgaagctgcacgggca
ttggatgtactgaattttactcctctcaatggcaaaccaattaggataatgtattctaac
agggatcccactgtccgtaaaagtggggcagggaatatatttatcaagaatttggacaag
acaattgacaacaaagctttacatgacacattttctacgtttggaaatattctatcttgc
aagatagctactgatcattctggccaatctaaaggatatgggtttgtgcaatttgataat
gaagagtctgccaaaaatgcaattgataagctgaatggtatgctacttaatgacaaacaa
gtttttgttggacctttccttcgtaaacaggaaagagagtcagctgtagacaaggtaaag
tttaacaatgtctatgtaaagaatctgtcagaatcaacaactgatgaggatttaaagaat
gtatttggtgactatggacctataactagtgctgtgattatgagagatgcagaaggaaag
tcaaaatgttttggatttgtcaactttgagaatcctgatgatgcagctcgttctgttgat
tctctcaatggaaagaagtttgatgataaagaatggtatgttgggaaggctcagaagaaa
tctgaaagagagatggaactgaaagggcggtatgagcagactttaaaggaaacagcagac
aaatttgaaggactgaatttatatgttaaaaacctagatgatagcatcaatgatgataag
cttagggaactgttctccgaatttggtacaatcacttcatgcaaggttatgtgtgatcct
aatggtataagtaggggctcaggctttattgccttttcaactgctgaagaagcatctaga
gctcttatggagatgaatggtaaaatggtagttaggaaaccactttatgttgcacttgct
caaaggaaagaagaaaggagagctaggttgcaggcacagttttctcaaatgcgtcctggt
gcaatgggacctgctgttggccctcggatgcccttgtatcctcctggtgctccaggtctt
ggacagcaactattctttggtcaaggccctcctgctataattcctccccaacctggattt
gggtatcagcagcaactagttcctggcatgaggccaaactttttcatgccaatggttcag
ccaggacagcagaatcagcgcccaggaggcagacgatctggagctggcctgatgcaacaa
ccacagcaaccacttcccttcttgcaggcacggatgcttcctaagggccatgtctaccgt
tatcccccaggtcgcaacatgcctgatgttccaatccctggtgttcctggaggcatgctt
cctgttccttatgacatgggtggaattccattcagagatgctgcattttcacagcccatg
gctactggggctcttgcttctgctctcgccaatgcaacacctgaacaacagaggacattg
ttgggagaaaacctatacccacttgtagaccagctggagcatgataatgcagcaaaggtg
acgggcatgcttctagagatggatcagactgaggttttacatttactagagtcaccagaa
gctttgaaagcaaaggttgcggaggccatggacgttctgaggaatgttggtccgcaacag
ccgcaagcaaatagtgcaactgatcggctggcctcgttgtctctaaatgacaaccttgtc
tcttga
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