Durio zibethinus (durian): 111317774
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Entry
111317774 CDS
T05242
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dzi
Durio zibethinus (durian)
Pathway
dzi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111317774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzi03019
]
111317774
03012 Translation factors [BR:
dzi03012
]
111317774
Enzymes [BR:
dzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111317774
Messenger RNA biogenesis [BR:
dzi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111317774
Translation factors [BR:
dzi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111317774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
Dicer_dimer
nSTAND3
AAA_19
Rad17
ATPase
T2SSE
Motif
Other DBs
NCBI-GeneID:
111317774
NCBI-ProteinID:
XP_022775910
UniProt:
A0A6P6BFR4
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MKDRPPSSCCAVYIPPHHRFRSVVFSPNSSNSSKNGADFPTSAASVIHSKLLDRQNIPVL
NAKGTAAPPPLSYLQHDEKQQQRQRTYNSNNGNKNSNNQSSQYNSAYCHGISKNGSDRQM
DLSLQSGTFGEANVDEWKRKLVILLHDDGKQELVSREKKDRRYFEQIAALASRMGLYSHL
YSKVAVFSKAPLPNYRFDLDDKRPQREVNLNFGLLKRVDAHLGEYLSKKSRTKESFSDNC
FSKSSSNSSIVTDEGLFEQPEPMASNTAIMEKILWRRSLQLHAQQQAWQESLEGRGILEF
RQSLPAYKEKDAILTAILQNQVLIISGETGCGKTTQIPQFILESEIDFVRGAVCNIICTQ
PRRISAMSVSERVASERGEKLGESVGYKVRLEGMRGKETRLLFCTTGILLRRLLIDRNLK
GVTHIIVDEIHERGINEDFLLIVLKDLLPRRPELKLILMSASLDAELFSSYFGGAPLIHI
PGFTHPVRIHFLENILEMMGYRLTPYNQIDDYGQERMWKMSKQAPRKRKSQIASAVEDAL
RAADFKDFSPQTWESLSCWNPDCIGFNLIEYLLSYICENERPGAVLVFVTGWDDISSLKD
KLQSHPILGDPNRVSLLTCHGFLASSEQKLIFEEPKDGVRKIVLTTNIAETSITINDVVF
VLDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRVEPGECYHLYPRCVYDAFAE
YQLPEILRTPLQSLCLQIKSLKLESISEFLSRALQSPELLAVQNAVEYLKIIGALDESEN
LTILGRYLTMLPMEPKLGKMLILGAILNCLDPVLTVVAGLSVRDPFLTPLDKKDLAETAK
LQFSRDYSDHLALVRAYEGWKEAEKDLAGYDYCWKNFLSAQSMKAIDSLRVEFLSLLKGT
GLIDGNATSCNTWSYDQHLIRAIICYGLYPGICSVVPHVQHNEKSFSLKTMEDGPVLLYS
NSVNARESRIPYPWLVFNEKIKVNSIFLRDSTAVSDSVLLLFGGSISRGNVDGHLKMLGG
YLEFFMQPAIAEKFQSLRREFDELIQNKLLNPQMVLHFHHELISAVRLLVSEDQCDGRFV
FGRQDLKPSTMPVMPPQPTLVSRTESGPGGDNSKSQLQTLLTRAGYAAPTYKTKQLKNNQ
FRATVEFNGMQIMGQPWNNKKSAEKDAAAEALKWLIGGTKTGHDYFNHMSMLLKKSKRDH
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcggcctccatcatcctgctgcgccgtctacatccctccccaccaccgtttc
cgttccgtcgttttctctcccaacagcagcaactctagcaagaacggagcagatttccct
acttccgccgcctcagtgattcactccaagctccttgaccgccaaaacatacccgttttg
aacgctaagggcactgctgctcctcctcctttgtcttacctacaacatgacgagaaacag
caacaacgtcagaggacttataatagcaataatggtaataaaaatagtaataatcaaagt
tcgcagtataattcagcttactgtcacgggatttctaagaacggctctgatcgccagatg
gatttgtctttgcaatcgggtacttttggtgaagctaatgttgatgagtggaagcgaaag
ttagtgatacttttacatgatgatgggaaacaggagttggtctcaagggaaaagaaagat
agacgatactttgagcaaatagcagctttggctagcagaatgggtttgtatagccatctt
tattccaaagttgctgtcttcagtaaggcccccctgcctaactacagatttgacctggat
gataagcgtccacagagggaggtgaacttaaattttggtttgttgaagagagtggatgcc
catcttggagaatacctttctaaaaagtctaggactaaggaaagcttttcagacaattgt
ttttcaaaatcaagcagtaatagcagtatagttaccgacgaaggactttttgagcagcca
gagccaatggcatccaacacggctatcatggagaaaattctttggcggagaagtttgcag
ctgcatgctcagcaacaagcatggcaggagtctcttgaaggaagaggaattctagaattc
cgtcaaagtcttcctgcttataaagagaaggatgccatattgacagccattttgcagaat
caggttcttattatctcaggtgaaactgggtgtggcaagaccacacaaattccccaattt
attttagaatctgagatagattttgttcgtggagctgtttgtaacattatatgtactcaa
cccaggcgaatatctgctatgtctgtttcagaaagagttgcttcagaaagaggagagaaa
ttgggtgaatctgttggatataaagtgcggcttgagggtatgagagggaaggaaacccgt
cttctcttttgcacaacaggcattttattgagaaggctgctaattgatagaaatttaaaa
ggtgtaactcatataattgtggatgagatccatgaacgtgggattaatgaagatttcctg
ctcattgtccttaaagatctccttcctcgccgcccagaattaaagctgattttgatgagt
gcctctctggatgctgagcttttctcctcgtattttggtggggctcctttaatccacatt
ccaggttttacgcacccagttcgaatacattttttggagaatattttggagatgatggga
tacaggttgactccatataatcaaattgatgattatggtcaagaaaggatgtggaaaatg
agtaagcaagccccaagaaagaggaagagccaaattgcctccgctgttgaggatgcactc
cgggcagccgattttaaggatttcagccctcagacttgggagtctttgtcatgttggaat
cctgattgtattggttttaatctcatagaatatcttttatcctatatttgtgagaatgaa
aggcctggtgcagttctagtttttgtgactgggtgggatgacataagttctctaaaggat
aagctgcaatctcatcctatccttggagatccaaaccgagtttcgttgcttacttgccat
ggttttttggccagttctgagcagaagttaatttttgaagagcccaaagatggagtgaga
aaaatagtattaactactaatattgctgagactagcatcacaattaatgacgttgttttt
gttcttgattgtggaaaggccaaagagacatcctatgatgcactgaataacactccttgt
ttgctaccatcatggatttccaaggtttctgctcaacaaagaagaggaagagctggccga
gtggaacctggagagtgttaccatctctatcctcgatgcgtttatgatgccttcgctgaa
tatcaattacctgaaattttgaggacaccattgcagtctctttgtttgcaaatcaaaagt
ttgaaactcgaaagtatatctgaattcctatcgagggcattgcagtcaccggagttacta
gcggttcaaaatgctgttgaatatttaaaaatcattggggccttggatgagagtgaaaat
ctgaccattttggggcgttatttgactatgcttccaatggagccaaaacttgggaagatg
ctcatccttggtgctattcttaattgcctggatcctgtattgactgttgttgctggtctt
agtgttagagatccatttttgacaccattagacaagaaagatcttgcagagactgcaaag
ttgcagttttcccgtgattacagtgaccaccttgcacttgttcgtgcctatgagggctgg
aaagaagctgagaaagaccttgctggatatgattattgctggaaaaattttctttctgca
caatcaatgaaggccattgattcacttagggtggagttcctttcattgctcaagggtact
ggtcttattgatggcaatgcaactagctgtaatacctggagctatgatcagcatcttatc
cgagcaattatttgttatgggctgtaccctggcatttgctctgttgtgcctcatgtgcag
cataatgagaaatcattttcactaaaaactatggaggatgggccggtgcttctatactca
aactccgttaatgctcgggaatctagaattccatatccttggctggttttcaatgagaag
ataaaagtgaactccattttcctgcgggattcaacagctgtgtctgattcagtacttctc
ctatttggtggtagcatctcacgaggaaatgttgatggacacttgaagatgttgggaggc
tatttggaatttttcatgcaacctgctatagcagaaaaatttcaaagcttaaggagagaa
tttgacgagctgattcaaaataaattactgaatccccaaatggtcctacatttccaccac
gagctcatttctgctgttaggttgctggtttctgaggatcagtgtgatggaagatttgta
tttggccgtcaggaccttaaaccatcaacaatgcctgttatgccaccacagcctactttg
gtttcaaggacagagagtgggccgggaggtgataattctaaaagtcagctccaaacactg
ctcactagggcaggatatgcggcgccaacctataagacaaagcaattgaaaaacaatcag
ttcagagccactgtcgagttcaatggtatgcaaatcatggggcagccttggaacaacaag
aagagcgcagaaaaagatgctgcagctgaggctctgaaatggctgatcggtggtaccaag
acgggccatgattatttcaatcacatgtcgatgctgctgaagaaaagcaagagggatcac
tga
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