Duganella zoogloeoides: SR858_00130
Help
Entry
SR858_00130 CDS
T09628
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo00061
Fatty acid biosynthesis
dzo00071
Fatty acid degradation
dzo01100
Metabolic pathways
dzo01212
Fatty acid metabolism
dzo02024
Quorum sensing
dzo04146
Peroxisome
Module
dzo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SR858_00130
00071 Fatty acid degradation
SR858_00130
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SR858_00130
09145 Cellular community - prokaryotes
02024 Quorum sensing
SR858_00130
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dzo01004
]
SR858_00130
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dzo04147
]
SR858_00130
Enzymes [BR:
dzo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SR858_00130
Lipid biosynthesis proteins [BR:
dzo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SR858_00130
Exosome [BR:
dzo04147
]
Exosomal proteins
Exosomal proteins of breast milk
SR858_00130
Exosomal proteins of breast cancer cells
SR858_00130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF1576
Motif
Other DBs
NCBI-ProteinID:
WQH04784
LinkDB
All DBs
Position
27297..28967
Genome browser
AA seq
556 aa
AA seq
DB search
MEKIWLKSYPEGVPAEIDSTQFRSITHLLEEAFRKYADRNAYVCMDKFLTYRELDQLSQQ
MGAWLQSLGLSPGARVAIMMPNVLQYPVAMAAILRAGYTVVNVNPLYTPRELQHQLIDSG
SEAIIVLENFATTLQQVVANTKVKHVVVATMGDMLGLVKGTIVNLVVRKVKKLVPAFSLP
GSISYKKMMAAAAGMTLKPVKQGHDDIAFLQYTGGTTGVSKGAVLLHRNIIANVLQNEAW
LQFKHSNEQLVFVAALPLYHIYSLTVSAFMGMRMGGLTLLIPNPRDIPGFVKELAKYRVA
VLPAVNTLYNALLNNPEFSKLDFSSYSVCNGGGMAVQKAVADKWLKVTGTPIIEGYGLSE
TSPVATANRVDIKEFTGTIGLPIPSTEVLIIDDDGRAVPLGQTGEIAIRGPQVMAGYWNR
ADETAKTMTADGFFKTGDIGIMDERGYTRIVDRKKDMIIVSGFNVYPNEVEGVVAGHPGV
LEVACIGVPDKNSGEAVKLFVVRKDPNLTAGQLLDFCKHELTAYKKPKFIEFRDELPKTN
VGKILRRQLRDEKTPA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctggctcaagtcctaccccgagggcgtcccggcggaaatcgacagcacg
caattccgctcgatcacgcacttgctggaagaagcattccgcaagtacgccgaccgcaat
gcctatgtgtgcatggacaagttcctcacctaccgcgagctggaccagctgtcgcagcag
atgggcgcctggctgcaaagcctgggcctgtcgccgggcgcgcgggtggcgatcatgatg
ccgaacgtgttgcagtacccggtggcgatggcggcgatcctgcgcgccggctacacggtg
gtcaacgtcaatccgctgtacacgccgcgcgagttgcagcaccagctgatcgactccggt
tccgaagccatcatcgtgctggaaaactttgccaccaccttgcagcaggtggtcgccaat
accaaggtcaagcacgtggtggtggccaccatgggcgacatgctgggtttagtaaaaggc
acgatcgtcaacctggtggtgcgcaaggtgaaaaagctggtgccggcgttctcgctgccc
ggctcgatctcgtacaagaaaatgatggcggctgccgccggcatgaccttaaagccggtc
aagcagggccacgacgacatcgccttcctgcaatacacgggcggtaccacgggcgtgtcc
aaaggcgcggtgctgctgcaccgtaacatcatcgccaacgtgctgcaaaacgaggcgtgg
ctgcaattcaagcacagcaacgagcaactggtgttcgtggcggcactgccgctgtaccac
atctattcgctgacggtgagtgccttcatgggtatgcgcatgggcggactgacgttgctc
attcctaatccgcgcgatatccctggcttcgtgaaggaactggccaagtaccgcgtggca
gtgctgccagcggtgaacaccctgtacaacgcgctgctcaataacccggagttttccaag
ctcgatttctccagctattcggtgtgcaacggcggcggcatggcggtgcagaaggccgtg
gccgacaagtggctcaaggtaaccggcacgccgatcatcgaaggctacggcttgtccgag
acgtcaccggtggccaccgccaaccgcgtcgatatcaaggaattcaccggcaccatcggc
ctgccgattccatcaaccgaagtgttgatcatcgacgacgacggccgcgcagtaccgctg
ggccagaccggcgagatcgccatccgtggcccgcaggtaatggccggctactggaaccgc
gccgatgaaaccgccaagaccatgaccgccgacggcttcttcaagaccggcgacatcggc
atcatggacgagcgcggctacacccgtatcgttgatcgcaagaaggacatgatcatcgtc
tcgggcttcaatgtgtacccgaacgaagtggagggcgtggtggccggccacccgggcgtg
ctggaagtggcgtgcatcggtgtgccggacaagaattcgggcgaagccgtcaaactgttc
gtggtgcgcaaggatccgaacctgacggccgggcagttgctggacttctgcaagcacgaa
ctgacggcgtataaaaagccgaagttcatcgagttccgcgatgagctgccgaagacgaat
gtgggcaagatcttgcggcgccagctgcgcgacgagaaaaccccggcataa
DBGET
integrated database retrieval system
