Duganella zoogloeoides: SR858_00680
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Entry
SR858_00680 CDS
T09628
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo03030
DNA replication
dzo03430
Mismatch repair
dzo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SR858_00680 (holA)
03430 Mismatch repair
SR858_00680 (holA)
03440 Homologous recombination
SR858_00680 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dzo03032
]
SR858_00680 (holA)
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_00680 (holA)
Enzymes [BR:
dzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SR858_00680 (holA)
DNA replication proteins [BR:
dzo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SR858_00680 (holA)
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SR858_00680 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
WQH04891
LinkDB
All DBs
Position
147428..148444
Genome browser
AA seq
338 aa
AA seq
DB search
MQLRLDALDGHLNKSLSQLYVITSDEHLLALEAADKIRRTARAQGYSERDVLTVERSFKW
GELLAANQALSLFGDKKLIELRIPTGKPGKDGGAALQAYVKDLSPDNLTLITLPKLDWQT
QKAAWVGALQQAAVYIDIPQIERAQLPNWIGQRLAAQGQSADRQSIDFIADRVEGNLLAA
HQEIQKLALLHEPGKLTYEQVHDAVLNVARYDVFKLSEAMLMGDPARLVRMLEGLKGEGE
ALPLVLWAVSEEIRTLLKLKAGMAQGRPLGALLKEYRIWGPKERMMDPALRRISLATLEA
AMKDAAQVDKMIKGLRAKAYSGDAWDAMLQLGLKVARG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgcgcctggacgcgctcgacggccacctgaacaagtcgctgtcgcagctgtat
gtgatcaccagcgacgagcatttgctggcgctggaggcggccgacaaaatccgccgcacc
gcgcgcgcgcaaggctattccgaacgcgacgtgctgacggtggagcgcagcttcaagtgg
ggcgaactgctggccgccaaccaggcgctgtcgctgttcggcgataaaaagctcatcgaa
ttgcgcatccccaccggcaagccgggcaaggacggcggcgccgcgctgcaagcgtacgtg
aaagacctgagccccgacaatctgacattgattaccctgcccaagctcgactggcaaacc
cagaaggcggcgtgggtgggggcgttgcaacaggcggcggtgtacatcgacatcccgcaa
atcgaacgggcgcaattgcccaactggataggccagcgccttgccgcacaagggcaaagc
gcggaccggcaaagtatcgacttcatcgccgatcgcgtggaaggcaatctgctggcggcg
caccaggaaatacaaaaactcgccctgctgcacgaacctggcaagctcacctacgagcaa
gtgcacgacgccgtactcaatgtggcccgctacgacgtcttcaaactcagcgaagcgatg
ctgatgggcgacccggcgcggctggtgcgcatgctcgaggggctgaaaggcgagggcgaa
gcgctgccgctggtgctgtgggccgtgtcggaagaaatccgcacgctgctcaagctcaag
gcgggcatggcgcagggccggccgctcggtgcgctgctcaaggaataccgcatctggggg
ccgaaagagcgcatgatggacccggcgctgcggcgtatttcactggccaccctggaagcg
gccatgaaagacgccgcgcaagtggacaagatgatcaagggcctgcgcgccaaagcctac
agcggcgatgcatgggatgccatgctgcagctggggcttaaagtggcgcgcgggtaa
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