Duganella zoogloeoides: SR858_00860
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Entry
SR858_00860 CDS
T09628
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SR858_00860 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzo03019
]
SR858_00860 (recQ)
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_00860 (recQ)
Enzymes [BR:
dzo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SR858_00860 (recQ)
Messenger RNA biogenesis [BR:
dzo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SR858_00860 (recQ)
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SR858_00860 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Se_S_carrier
GARS_N
Motif
Other DBs
NCBI-ProteinID:
WQH04921
LinkDB
All DBs
Position
complement(187167..188984)
Genome browser
AA seq
605 aa
AA seq
DB search
MNQENQERALHLLETVFGYPAFRGHQAEIVDHVSNGGDALVLMPTGGGKSLCYQIPALLR
DGVGVVVSPLIALMQDQVDALEEVGVRAAFLNSTQTYEEANRIERLVRTGQIDLVYVAPE
RLMTERCLNLFQDSKIALFAIDEAHCVSQWGHDFRPEYIRLSVLHEQFPDVPRIALTATA
DPQTRAEIVHRLQLGDAAQFVSSFDRPNIRYQIVEKANGRKQLLDFITTEHTGDCGIVYC
LSRKKVEETAEFLNENGIRALAYHAGMDHAKRAANQARFLREENIVMCATIAFGMGIDKP
DVRFVCHLDLPKSIEGYYQETGRAGRDGGPASAWMAYGLQDVVLQRRMIDESEADETFKR
VLGTKLDAMLGLCETLSCRRVRLLDYFGEQSGPCGNCDTCLIPPVSFDGTVPVQKLLSAV
YRVDQRFAAGHVIEVLRGVETDRIKTWHHDSLSVFGIGADRSEHEWRAILRQMIALGLLT
VDHEQYSSLKLTDAARPVLKGGQKVQLRQYQKPVKQKTPRASKGYVESDLSAAEEKIFDR
LRSWRMGTAREHNVAAYIIFNDATLREIAKARPTALDDLRGISGVGEKKLASYGDQIVEL
IREFE
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggaaaaccaggagcgcgctctccatttgctggaaaccgtgttcggctacccg
gcctttcgcggtcaccaggccgagatcgtcgatcatgtcagcaacggcggcgacgccctg
gtcctgatgcccaccggcggcggcaagtcgctgtgttaccagattcccgccctgctgcgc
gacggcgtgggcgtggtggtttcccccttgatcgcgctgatgcaggaccaggtcgatgcg
ctggaagaagtgggcgtgcgcgccgccttcctcaattccacccagacctacgaagaagcc
aaccgcatcgagcggctggtgcgcaccggccagatcgacctggtgtacgtggcgcccgag
cgcctgatgaccgagcgctgcctgaatttattccaggactcgaagatcgccctgtttgcg
atcgacgaggcgcactgcgtgtcgcaatggggccatgatttccgtcccgaatacatccgc
ctgtcggtgctgcacgagcagttccccgacgtgccccggattgcccttactgccacggcc
gacccgcaaacccgcgccgagatcgtgcaccgcctgcaactgggcgacgcggcgcagttc
gtctcgtcgttcgaccgccccaatatccgctaccagatcgtcgaaaaggccaacggccgc
aagcagctgctcgacttcatcaccaccgagcacacgggtgactgcggcatcgtgtattgc
ctgtcgcgcaaaaaggtcgaggagaccgccgaattcctcaacgaaaacggcatccgcgca
ctggcctaccacgccggcatggaccacgccaagcgcgccgccaaccaggcccgcttcctg
cgcgaagaaaacatcgtcatgtgcgccaccatcgccttcggcatgggtatcgacaagccg
gacgtgcgtttcgtctgccacctcgacctgccgaaaagcatcgagggctattaccaggag
actggccgggccggccgcgatggcggtcccgccagcgcctggatggcctatggtttgcag
gacgtggtgctgcaacgccggatgatcgacgagtccgaagcggacgaaaccttcaagcgc
gtgctcggcaccaagctcgacgccatgctgggcctgtgcgaaaccctgagttgccgccgc
gtgcgcctgcttgattatttcggtgagcaatcgggaccgtgcggcaactgcgatacgtgc
ctgattccaccggtgtcgttcgacggcacggtgccggtgcaaaagctgctctcggccgtc
tatcgcgtggaccagcgctttgccgccggccacgtgatcgaagtgctgcgcggcgtggaa
accgaccgcatcaagacctggcaccacgacagcctgtcggtgttcggcatcggcgccgac
cgcagcgagcacgagtggcgcgccatcctgcgccagatgatcgcgctcggcctgctcacg
gtggaccacgaacaatacagctcgctgaaactgaccgacgctgcccgtcccgtgctcaag
ggcggccagaaagtacagctgcgccaatatcaaaagccggtcaagcagaagaccccgcgc
gcctcgaaaggctacgtggaaagcgatttgtcggccgccgaagaaaaaatcttcgaccgc
ctgcgcagctggcgcatgggcacggcgcgcgagcacaacgtcgccgcgtacatcatcttc
aacgacgccaccctgcgcgaaatcgccaaggcccgtcccaccgcgctcgacgacttgcgc
ggcatttccggcgtgggcgagaaaaagctggcatcgtatggcgaccagatcgtggaactg
atccgcgagttcgagtag
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