Duganella zoogloeoides: SR858_02120
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Entry
SR858_02120 CDS
T09628
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dzo03000
]
SR858_02120
Transcription factors [BR:
dzo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SR858_02120
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
Motif
Other DBs
NCBI-ProteinID:
WQH05146
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Position
467336..468301
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AA seq
321 aa
AA seq
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MNIRHLSFRLLQIYVQVVRSGSISAAARAMHLTQPTVSLQMKRLAEAVGAPLFEQREGRF
ERTAVGEELFCAACDVLGRFDDFNGYLERARGGASGHINVAVVTTAKYVLPRIMGAFYRQ
FPEIGITLSVGNRAQIVSRFERQEDELYVFSHPPSGPQVQAARILRNPLQMIAPLDHWAA
GGPPVTMAQLRGERFLVREPGSATRMMFESWLSAQGMDLGNTMQVESNEAIRLSVASGLG
VSVISEHTLQEGRERLAVLPVAGFPLESNWYLVARKDRRLSAPAHSLIRFIAGHLHECVE
PDWVAPGIAGLDAQFMPAARA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccgccacctgagttttcgcctgctgcaaatctacgttcaagtggtgcgcagc
ggcagcatttccgccgctgcccgcgccatgcacctgacccagcccacggtctcgctgcaa
atgaaacggctggcggaggcggtcggcgcgccgctgttcgagcagcgcgaagggcgcttc
gagcgcactgccgtgggcgaagaactgttttgcgccgcctgcgacgtgctgggccgcttc
gacgatttcaacggctacctggagcgcgcgcgcggcggcgcgtccggccacattaacgtg
gccgtggtcaccacggcgaaatacgttttgccgcgcatcatgggcgccttttaccggcag
tttcccgagatcggcatcacgctcagcgtgggcaaccgggcccagattgtcagccgcttc
gagcgccaggaggatgaactctatgtgttcagccatccgccgagcggcccgcaggtgcag
gccgcgcgcatcctgcgcaatcccttgcagatgattgcgccgctcgatcactgggccgct
ggcgggccgccggtgacgatggcgcagttgcgcggcgagcgtttcctcgtgcgtgagccg
gggtcggccacgcggatgatgttcgagtcgtggctcagcgcccagggcatggatctcggc
aacaccatgcaggtcgagagcaacgaggcgattcgcctgagcgtggcgtcggggttgggg
gtgtcggtgatttccgagcacaccttgcaggagggccgcgaacggctggcggtgctgccg
gtggccggctttccgctcgagagcaactggtacctggtggcgcgcaaggaccgccgcctg
tcggcgccggcgcacagcctgatccggtttatcgccggccacctgcacgagtgcgtggaa
cccgactgggtggcgcccggcattgccgggctggacgcgcagttcatgccggctgcgcgt
gcctga
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