Duganella zoogloeoides: SR858_02605
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Entry
SR858_02605 CDS
T09628
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo03030
DNA replication
dzo03410
Base excision repair
dzo03420
Nucleotide excision repair
dzo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SR858_02605 (polA)
03410 Base excision repair
SR858_02605 (polA)
03420 Nucleotide excision repair
SR858_02605 (polA)
03440 Homologous recombination
SR858_02605 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dzo03032
]
SR858_02605 (polA)
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_02605 (polA)
Enzymes [BR:
dzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SR858_02605 (polA)
DNA replication proteins [BR:
dzo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SR858_02605 (polA)
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SR858_02605 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SR858_02605 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF3313
Motif
Other DBs
NCBI-ProteinID:
WQH05241
LinkDB
All DBs
Position
578833..581598
Genome browser
AA seq
921 aa
AA seq
DB search
MQNTLLLVDGSSYLYRAFHALPDLRSPDGYPTGAMHGMVNMLRRLRADYPAAYIACVFDA
KGKTFRDDMYPEYKATRAPMPDDLRLQIEPIHEAVKAMGWPILMVDGVEADDVIGTLCVD
AVKAGMKVVVSTGDKDLAQLVNPNVMLINTMNNEKMDEAGVLAKFGVPPNRIIDYLTLIG
DTVDNVPGVSKCGPKTALKWLTAYDSLDGVMSNADKITGAVGENLRTALAWLPRSRELIT
VKTDCDLADHMMSISESLVARPEDGPTLVTFFTTYGFKTLMRELSAVTPTAAATAAAAKA
VPAGGAVSATQDMFGEPPKVNVNYEMVLTDAQLDKWLALIDAAVLTAVDTETTSLEPMTA
QLVGISLSTEPGMACYIPVAHAYAGVPEQLSREHVLAKLKPWLEDDSKLKVGQNLKYDSH
IFANHGVQLRGIHHDTLLQSYVFESHRTHGMDDLALRHLDHTTIPFVDVCGKGVNMITFD
KVELQRATDYAAEDADITLRLHGVMAAQVENDDKLNYIYRQIELPTAVVLQKIERNGVHI
DAALLDIQSAELGARIVELEAQAHELAGQPFNLGSPKQIGEIFFQKLQLPVVKKTPSGAP
STDEEVLQKLAEDYPLPKVLLEYRSLSKLKSTYTDKLPKMINQDTGRVHTNYAQAVAVTG
RLASNDPNLQNIPVRTREGRRIREAFIAPPGSHLVSADYSQIELRIMAHISGDEAMLRAF
ADGEDIHRATAAEIFGVPPAEVTSEQRRYAKVINFGLIYGMSAFGLTANLNIERAAAQNY
IDRYFARFSGVKQYMDDTRLQAKARGYVETVFGRRLWLPEINSPNGPRRQGAERAAINAP
MQGTAADLIKLAMVAVQNWLEADKLQTRMIMQVHDELVLEVPDAELELVKQKLPELMAGV
AQLKVPLLAEVGVGKNWEEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataccctgctgttagtcgacggttccagttacctttatcgcgctttccacgcg
ctgcccgacctgcgcagcccggacggctaccccaccggcgccatgcacggcatggtcaat
atgttgcgccgcctgcgcgccgactacccggccgcctacatcgcctgcgtgttcgacgcc
aagggtaaaaccttccgcgacgatatgtatcccgaatacaaggccacgcgcgcgccgatg
ccggacgacctgcgcctgcagatcgagccgatccacgaggcggtcaaggccatgggctgg
ccgatcctgatggtcgatggcgtggaagcggacgacgtgatcggcaccctgtgcgtggat
gcggtcaaggccggcatgaaggtggtggtgtccaccggcgacaaggatctggcgcaactg
gtcaatccgaacgtcatgctgatcaacaccatgaacaacgagaagatggacgaagccggt
gtgctggccaagttcggcgtgccgccgaaccgcatcatcgactacctgaccctgatcggc
gacacggtcgataacgtgccgggcgtctcgaaatgcggcccgaaaaccgcgctcaaatgg
ctcaccgcctacgactcgctcgacggcgtaatgagcaatgccgacaagattaccggcgcc
gtcggcgaaaacctgcgcaccgcgctggcctggctgccgcgcagccgcgagctgatcacg
gtaaaaaccgactgcgacctggccgatcacatgatgtcgatcagcgaatcgctggtggcg
cggcccgaggatggtcccaccctggtcacgttcttcaccacgtacggcttcaaaaccctg
atgcgcgagctgagcgcggtgacacccaccgctgcggccacggctgctgctgccaaggca
gtaccggccggcggcgcggtctcggccacgcaggacatgtttggcgagccgcccaaggtc
aacgtcaactacgagatggtgctgaccgacgcccagctcgataaatggctggcgctgatc
gatgcggccgtgttgacggcagtcgataccgaaaccacgtcgctcgaaccgatgaccgcg
caactggtgggcatctcgctgtccaccgagccgggcatggcctgctacatcccggtcgcg
cacgcgtacgcgggcgtgccggagcagctgtcgcgcgagcacgtgctggcaaaactcaag
ccatggctcgaagacgacagcaagctcaaggtgggccagaacctcaagtacgacagccac
atcttcgccaaccacggcgtccagctgcgcggcatccaccacgacaccctgctgcaatcg
tacgtgttcgaatcgcaccgcacccacggcatggacgacctggccctgcgccacctcgat
cacaccacgattccgttcgtggacgtatgcggcaagggcgtcaacatgatcacgttcgac
aaggtggaactgcaacgtgccaccgactacgcggccgaggacgccgacatcaccttgcgc
ctgcacggcgtgatggcggcccaggtggaaaacgacgacaagctcaactacatctaccgc
cagatcgagctgccgaccgccgtggtgctgcaaaagatcgaacgcaacggcgtccacatc
gacgccgcgctgctcgacatccagtccgccgaactgggcgcgcgcatcgtcgaactcgaa
gcacaggcgcacgagttggccggccagccgttcaacctcggttcgcccaagcagatcggc
gaaattttcttccagaagctgcaactgccggtggtgaaaaagaccccgagcggcgcacca
tcgaccgacgaggaagtgctgcaaaagctggccgaggactacccgctgccgaaagtgctg
ctcgaataccgcagtctgtccaagctcaagtccacgtacaccgacaagctgcccaagatg
atcaaccaggacaccggccgcgtgcacaccaactacgcgcaggcggtggcggtgacgggc
cggctggcatcgaacgaccccaacctgcaaaacatcccggtacgcaccagggaaggtcgc
cgcatccgcgaagcgttcattgcgccgccgggcagtcacctggtgtcggccgactattcg
cagatcgagctgcgcatcatggcccatatctcgggcgacgaagcaatgctgcgcgccttt
gccgacggcgaggacatccaccgcgccaccgccgccgagatcttcggcgtgccgccggcc
gaggtgaccagcgagcagcgccgctacgccaaggtgatcaattttggtttgatctacggc
atgagcgcgttcggcctgaccgccaacctgaacatcgagcgcgccgccgcgcaaaattac
atcgaccgctacttcgcgcgcttttcgggcgtgaagcagtacatggacgacacccgcctg
caggcgaaagcgcgcggctacgtggaaaccgtgttcggccgccgcctgtggctgcctgaa
atcaattccccgaacggcccgcgccgccagggcgccgagcgcgcggcaatcaacgcgccg
atgcaaggcacggccgccgacctgatcaagctggccatggtggcagtgcagaactggctg
gaagcggacaaattgcaaacccgcatgatcatgcaggtacacgacgaactggtgctggaa
gtgcccgatgccgagctggagctggtcaagcagaagctgccggaactgatggcaggcgtg
gcgcaattgaaagtgccgctgctggcggaagtgggtgtcggtaaaaactgggaagaggcg
cactaa
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