Duganella zoogloeoides: SR858_03570
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Entry
SR858_03570 CDS
T09628
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo03420
Nucleotide excision repair
dzo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SR858_03570
03430 Mismatch repair
SR858_03570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_03570
Enzymes [BR:
dzo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SR858_03570
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SR858_03570
MMR (mismatch excision repair)
Other MMR factors
SR858_03570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_11
AAA_30
T2SSE
Motif
Other DBs
NCBI-ProteinID:
WQH05430
LinkDB
All DBs
Position
complement(803812..805746)
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AA seq
644 aa
AA seq
DB search
MTRRIGQPDTQADLDLRACLDERPPHSFVMVAGAGSGKTTSLVKALDHLGQTRRKELKTH
GQRIACITYTEVAVNEIWGDVGNDPLFHVSTIHSFLWSVVRPFQSDLKIWVIARIHEKIA
EAQEHHDKPRTRAATRVQLLAEIARYQSHLQTIEDQTHFKYGAGSDFGRGVLGHSDVIAA
AVKLIDQSQLLRDIIASRYPVLFVDESQDTRPEIVAALRGIAETTSVEFSLGFFGDPMQK
IYADGAGVIDAPDDWRRITKPENFRCPQRVLGVVNAVRQLGDGLVQTRGRMMSVDGVQVP
LEGSARIFLLAVDEDRSAKIAKVRKWMRLTNHDERWESGDRAADVRALVVVHRMAATRLG
FPNLYAALNDRAPSSIKEGLKDGTSWPLKPFLAYLLPLANAVRNNQGFEVMSLLRAECHQ
LSSAGLAGGNAPDIFRALQTSTEEIARLVLSGDVTFLDVLLFASRNGLMLLDESWTKYLE
ADPATLAADDDPEVPAVTAFLNCRIGELGAYHHYLEDLSPYATQQGVKGAEFERVLVIID
DAEGQGQRLFSYEKYFGIAPLSDTDDENIAAGLDNVIDRTRRLFYVCCSRATRDLAVVMF
VHNIAVAKACVERSELFAPESIVDDAFLEATLSLSESSGTSRWS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgactcggcgtatcggacagcctgatacgcaggcagatctggatctgcgcgcctgtctg
gacgagcgtcccccacatagcttcgtgatggttgctggtgctggttcaggaaagactacc
tctcttgtgaaggcactcgaccatttaggacaaacgcgaagaaaagaactcaagacgcac
ggccagcggatcgcctgtatcacctatacggaagtcgcagtcaatgaaatttggggcgat
gtagggaacgatccgctatttcacgtatcgacgattcacagtttcttgtggtcggtagtg
cgaccttttcaaagcgacttgaaaatctgggtaatagcacgcatccatgaaaaaatcgcc
gaagcacaagaacatcacgacaagcctaggactcgtgcggccacgcgcgttcaactactc
gcagagatcgcccgctatcagagccatcttcagactatagaagaccaaacacacttcaag
tatggtgcgggcagcgacttcggacgtggtgttcttggtcactctgacgtcattgccgca
gcagttaagctaatcgaccaaagccagctgctacgcgacattatcgcaagtcgctacccc
gtgctgttcgtcgacgagagtcaagatacccggccggaaatcgtcgccgctttgcgcggc
atagccgagaccacctcggtcgaattctcgctaggattttttggcgacccgatgcagaaa
atatacgcggatggtgccggcgtgattgatgcgcccgatgattggcgaaggattacgaaa
ccggagaacttcagatgcccgcagcgcgtgcttggcgtcgtgaacgcagtgcgccaatta
ggtgatggactggtgcagactcgtggtcggatgatgtccgtcgatggagttcaggttcca
ttagaaggttcggcgagaattttcctacttgctgtcgacgaggaccgctcagcgaagatt
gcaaaggttcggaaatggatgcgactgaccaaccatgacgagcgttgggagagcggagat
cgcgcagcagacgtccgagcactggtggtcgtgcatcgcatggccgcaactcgactcggc
tttcccaacttgtacgcagcgttaaacgacagagccccctccagcatcaaggaaggactt
aaggacggcacttcatggccactaaagcctttcctagcctacttgctacctttggcaaac
gcggtaaggaataatcagggcttcgaggtgatgagcttactgcgtgctgaatgccaccag
ttgagttcggctggactggcgggtggcaacgctcccgatattttcagggcactgcaaacc
tccacagaggaaattgcccgcctcgtactgtcgggtgatgtgacattcctagatgtgctc
ctctttgcttcgcgtaatgggttaatgctgctcgacgaatcatggaccaaatatttggag
gctgatcctgcgaccctcgctgccgatgatgaccctgaggtcccagcagtaacggcattt
ctaaactgtcgtatcggggaattgggcgcctaccatcactacctggaagatctttcgcca
tatgccacccagcaaggcgtgaagggggcagagttcgagcgggtgctagtcataatcgat
gatgcggaaggccaaggtcaacggctgttctcctacgaaaaatacttcggcatagcgcct
ctgtcagatacagatgatgaaaacattgcggctggtctggacaacgtaattgaccgcact
agacgcctcttttatgtctgctgctcacgtgccacacgcgacctcgctgttgttatgttc
gtccacaatatcgcggtagcgaaggcttgcgtcgagcgctctgaactttttgcaccagaa
agtattgtagacgacgcctttcttgaagcgactctgtctttaagtgaatcttctggaact
tctaggtggagctaa
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