Duganella zoogloeoides: SR858_04245
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Entry
SR858_04245 CDS
T09628
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SR858_04245 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dzo03019
]
SR858_04245 (groL)
03110 Chaperones and folding catalysts [BR:
dzo03110
]
SR858_04245 (groL)
03029 Mitochondrial biogenesis [BR:
dzo03029
]
SR858_04245 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dzo04147
]
SR858_04245 (groL)
Enzymes [BR:
dzo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SR858_04245 (groL)
Messenger RNA biogenesis [BR:
dzo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SR858_04245 (groL)
Chaperones and folding catalysts [BR:
dzo03110
]
Heat shock proteins
HSP60 / Chaperonin
SR858_04245 (groL)
Mitochondrial biogenesis [BR:
dzo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SR858_04245 (groL)
Exosome [BR:
dzo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SR858_04245 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SR858_04245 (groL)
Exosomal proteins of breast cancer cells
SR858_04245 (groL)
Exosomal proteins of colorectal cancer cells
SR858_04245 (groL)
Exosomal proteins of bladder cancer cells
SR858_04245 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WQH05561
LinkDB
All DBs
Position
complement(975897..977546)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEVIFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEV
ELKDKLQNMGAQMVKEVASRTSDNAGDGTTTATVLAQAIVREGMKFVAAGMNPMDLKRGI
DKAVAATVEELKKIAKPTTTTKEIAQVGAISANSDSSIGERIAEAMEKVGKEGVITVEDG
KSLNDELDIVEGMQFDRGYLSPYFINNQEKQVAALESPFVLLCDKKISNIRDLLPVLEQV
AKAGRPLLIIAEDIEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQV
VAEEVGLTLEKITLEELGQAKRIEVGKENTIVIDGAGQAAAIEGRVKQIRVQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RARAQVAGLKGDNPDQDAGIKIVLRAMEEPLRMIVQNAGEEASVVVAAVLAGTGNYGYNA
ANGTYGDMVEMGVLDPAKVTRSALQNAASIAGLMLTTDCMIAESADDKAAGGMGGMGGMG
GMGGMDGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttatcttcggcgacgcagcgcgcgccaaaatggtagaaggcgtc
aacattctggccaacgccgtcaaagtcaccctgggcccgaaaggccgcaacgtggtcctg
gagcgctcgttcggtgccccaaccgtcaccaaggacggcgtatcggtcgccaaagaagtc
gaactgaaagacaagctgcagaacatgggcgcgcaaatggtcaaggaagttgcttcccgc
accagcgacaacgccggcgacggcaccaccaccgccaccgtgctggcccaggcaatcgtg
cgcgaaggcatgaagttcgttgccgccggcatgaacccgatggatctgaagcgcggtatc
gacaaggccgttgcagcgaccgtcgaagaactgaaaaaaatcgccaagcctaccaccacc
accaaggaaatcgcccaggttggcgcgatctcggccaactcggattcgtcgatcggcgaa
cgcatcgctgaagcgatggaaaaagtcggcaaggaaggcgtgatcaccgtggaagacggc
aagtcgctgaacgacgagctcgacatcgttgaaggtatgcagttcgaccgcggctacctg
tcgccatacttcatcaacaaccaggaaaagcaggttgctgccctggaaagcccgttcgtg
ctgctgtgcgacaagaaaatctcgaacatccgtgacctgctgcccgtactggaacaagtt
gccaaagccggccgtccactgctgatcatcgccgaagacatcgaaggcgaagcgctggcc
accctggtggtgaacaacatccgcggcatcctgaaaaccgttgccgtgaaagccccaggc
ttcggcgaccgtcgtaaagccatgctggaagacatcgccatcctgaccggcggccaggtt
gttgctgaagaagtcggcctgaccctggaaaagatcaccctggaagagctgggccaggcc
aagcgtatcgaagtcggcaaggaaaacaccatcgtcatcgacggtgccggtcaagccgct
gcaatcgaaggccgcgtcaagcaaatccgcgtgcagatcgaagaagcgacctcggactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gttggcgctgccaccgaagtcgaaatgaaagaaaagaaagcccgcgttgaagatgcactg
cacgctacccgcgctgccgtggaagaaggcattgtggctggcggcggcgttgccctgctg
cgcgcccgcgctcaagttgctggcctgaagggcgacaatcctgaccaggacgcaggtatc
aagatcgtgctgcgcgcgatggaagagccgctgcgcatgatcgtgcaaaacgccggcgaa
gaagcgtcggtcgtcgtggcagcggttctggccggcaccggcaactacggctacaacgcc
gccaacggcacctacggcgacatggtcgaaatgggtgttctggatccagcaaaagttacc
cgttcggcactgcaaaacgcagcctcgatcgccggcctgatgctgaccaccgactgcatg
atcgctgaatcggctgacgacaaagcagctggcggcatgggtggcatgggtggcatgggc
ggtatgggtggtatggacggcatgatgtaa
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