KEGG   Duganella zoogloeoides: SR858_05720
Entry
SR858_05720       CDS       T09628                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
dzo  Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:dzo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dzo03400]
    SR858_05720
Enzymes [BR:dzo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SR858_05720
    5.6.2.6  RNA 3'-5' helicase
     SR858_05720
DNA repair and recombination proteins [BR:dzo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SR858_05720
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Dioxygenase_N
Other DBs
NCBI-ProteinID: WQH05836
LinkDB
Position
1294908..1297754
AA seq 948 aa
MTARPRTSLRAQLARPRPAPASATVESRANKLVSMPANKSVVTAASEMNDPLTDSASAPA
IDPAGNPVAGAQAGPEANPPINPAAETDVSSSAKVPAGSVANASVKSSARSATNLSAQVP
ARRGANPVAKSTGPSSTQAKAWFAARGWKVFPFQRDVWQAAMAGQSGLLHASTGAGKTYA
VWFAALQRAALHKRPRVGLKVLWLTPMRALAADTLRALQESATDLLPAWQIEARTGDTGS
AQRARQNKRLPDTLVTTPESLTLMLSKADAVAQFAQLDMVIIDEWHELMGNKRGVQTQLA
LARLRHWNPGLVVWGLSATLGNLVQAREALMPDGVAVEGHVAKDIVVDTLIPDHPSRFPW
GGHLGLQMLPRVVEEIERHATTLVFTNTRSQAELWYQNMLDARPDWAGLIALHHGSLDKQ
VRDWVELGLKNGQLKAVICTSSLDLGVDFLPVQRVLQIGSAKGIARLLQRAGRSGHAPGR
VSRLTLVPTQSMELLEAAGARQAVAARDIEARPVPYKPLDVLVQHMVTIALGGGFRSAEL
LAEVRTAWSYRDLTEEEWQWALDFIARGGQTLAVYPEYRRVLPDDEGVYRVPDAAIGRRH
RMGIGTIVSDSSLQVKYVSGGRLGSVEESFISRLKQGDHFLFAGRILEFVRLHEMTAYVR
RATGTRGAVPRWQGGRMPMSSELAHAALEQLRLATIDGAESLGPEMQAIAPLLATQQKWS
ALPTPDTTVIETMHSREGRHLFMFPFAGRSVHVGLASLIAWRVARVTPVTFSIAVNDYGF
ELLAAQELDWTALLDVGHGAKAGLFGTDNLLEDVLASLNATELSQRRFREIARIAGLIFQ
GFPGQPKSARQLQASSALFFSVFRQHDAGNLLLTQAQREVLEQELELTRLRATLEELQAR
HISFHQTKRATPFGFALMVERFREKLSTEKLSDRVARMVRELEKAAGP
NT seq 2847 nt   +upstreamnt  +downstreamnt
atgacggcgcgcccccgcaccagcttgcgcgcccagctggccaggccgcgtcctgcgcca
gccagtgcaacggtcgaaagccgcgccaataagcttgtttccatgcctgccaacaagtcc
gtcgtcaccgcagccagcgagatgaacgatccgctgaccgattccgcttctgcaccagcc
atcgatccggccggcaacccggtcgcgggagcgcaagccggaccggaagccaacccgcca
atcaacccggccgccgaaaccgatgtcagctcgtcagccaaggttcccgccgggtcggtc
gccaacgcctcggtcaagtcttccgccaggtcagccaccaacctgtcggcccaagtccct
gccaggcggggcgccaacccggtcgccaaatccaccggcccctcatcgacgcaagccaaa
gcctggttcgccgcgcgcggctggaaggtatttccattccagcgcgatgtctggcaagcc
gcgatggccggccagtcgggcctgctgcacgcgagcaccggcgccggtaaaacttacgcg
gtgtggtttgccgccttgcagcgcgcagccctgcacaagcgcccgcgcgtgggcctgaaa
gtactgtggctgacgcctatgcgggcgctggcggccgacaccctgcgcgccttgcaggaa
tcggccaccgacctgctgccggcgtggcagatcgaggcgcgcaccggcgacaccggttcg
gcccagcgcgcgcgccagaacaaacgcctgcccgacaccctggtcaccacgcccgaaagc
ctgaccctgatgctgagcaaggccgatgcggttgcccagttcgcccagctggacatggtg
atcatcgacgaatggcacgagctgatgggcaacaagcgcggcgtgcagacccagctggcg
ctggcgcgcctgcgccactggaatccgggcctggtggtgtggggcctgtcggcgacgctg
ggcaacctggtgcaagcgcgcgaggcgttgatgcccgacggcgtggcagtggaaggccat
gtcgccaaggacatcgtggtcgataccctgatccccgaccatccgtcgcgctttccgtgg
ggcggccacctgggcctgcaaatgctgccgcgcgtggtcgaggaaatcgaacgccacgcc
accacgctggtgtttaccaatacccgttcgcaggccgagctgtggtaccagaacatgctc
gatgcccgtcccgactgggccgggttgatcgcgctgcaccacggttcgctcgacaagcag
gtgcgcgactgggtggagctgggccttaaaaacgggcaactgaaagccgtgatttgcacc
tcgagcctggacctgggcgtcgatttcctgccggtgcaacgggtgctgcaaatcggcagc
gccaagggcatcgcccgcttgctgcaacgggccgggcgcagcggccacgcaccgggccgc
gtttcgcgcctgacactcgtgcccacccaaagcatggaactgctggaagcggccggcgcc
cggcaagcggtggccgcgcgcgatatcgaggcgcggccggtgccgtataaaccgctcgac
gtgctggtgcagcacatggtgaccattgcgctgggcggcggcttccgttcggcggaattg
ctggccgaagtgcgcaccgcgtggtcgtaccgcgacctcaccgaagaagagtggcaatgg
gcgctcgattttatcgcccgtggtggccagaccctggccgtgtatcccgaataccggcgc
gtgctgcccgatgacgagggcgtctatcgcgtgccggacgccgccatcggacgccgtcac
cggatgggcatcggcaccatcgtctccgattccagcctgcaagtgaaatacgtgagcggc
gggcggctgggcagcgtggaggaatcgttcatctcgcgactgaaacagggcgaccatttc
ctgtttgccggccgcatcctggaattcgtgcgcctgcacgaaatgaccgcctacgtgcgc
cgcgccaccggcacccgtggcgccgtgccgcgctggcagggcggcaggatgccgatgtcg
tccgagctggcccatgccgcgctcgagcagctgcgcctggccaccattgacggcgccgaa
tcgctgggcccggaaatgcaggcgattgcgccactcttggccacgcagcaaaaatggtcg
gcgctgcccacgcccgacaccaccgtgatcgaaaccatgcacagccgcgaaggacgccac
ctgttcatgtttccatttgcaggccgctcggtccacgtcggcctggcgtcgctgattgcc
tggcgcgtggcgcgggtaacgccggtgacgttttcaatcgctgtcaacgattacggcttc
gagctgctggccgcgcaagaactcgattggacggcgctgctggacgtggggcatggcgcc
aaagccggtctgttcggcaccgacaatttactggaagacgtgctggccagcctgaacgcc
accgaactgtcgcagcggcgctttcgcgaaattgcccgcattgccggcctgatcttccag
ggctttcccggccaacccaagagtgcgcgccagttgcaggcctcgtcggcgctgttcttt
tccgtgttccgccagcacgatgccggcaacctgctgctgacgcaagcccagcgcgaggtg
ctggagcaggaactggagctgacccgcctgcgcgccacgctggaagagttgcaggcgcgc
cacatcagctttcaccagaccaagcgcgccacgccgttcggctttgcgctgatggtcgaa
cgcttccgcgaaaaactcagcaccgagaaactgtcggaccgggtggcgcgcatggtgcgc
gagctggaaaaggcggcgggaccatga

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