KEGG   Duganella zoogloeoides: SR858_06000
Entry
SR858_06000       CDS       T09628                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
dzo  Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:dzo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dzo03016]
    SR858_06000
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dzo02048]
    SR858_06000
Transfer RNA biogenesis [BR:dzo03016]
 Prokaryotic type
  tRNA degradation factors
   SR858_06000
Prokaryotic defense system [BR:dzo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    SR858_06000
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: WQH05889
LinkDB
Position
complement(1360597..1361007)
AA seq 136 aa
MLQSMLDTNICIYLMKNQPPTVARRFAQCRVGDVMISAITYAELEFGVLVSSDRVRQRRH
LNNLIKSIPVAPFDVRAAAAYGPIRHATQERKRDQLDKLIAAHALSLQIILVTNNVRDFV
AYPGIQIENWLDEPAP
NT seq 411 nt   +upstreamnt  +downstreamnt
atgctccagtccatgctggacaccaatatctgcatttacctgatgaaaaatcagccgccg
acagttgcacgccgctttgcgcaatgtcgtgtcggcgatgtgatgatttcggccatcact
tacgccgagctggaattcggtgtcttggtcagcagcgaccgcgtacgtcagcgccgacat
ttgaacaacctgatcaagtccattcctgtggcgcctttcgatgtccgcgccgccgctgcc
tatggcccaatacgtcacgccacgcaggagcgcaaacgcgatcagctcgacaagctgatc
gcggcccatgcgttgtcgctgcaaattattttagtgaccaataacgtccgtgatttcgtt
gcctatcctgggatacagatcgagaattggctggatgagccagccccatag

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