Duganella zoogloeoides: SR858_06315
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Entry
SR858_06315 CDS
T09628
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo03030
DNA replication
dzo03430
Mismatch repair
dzo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SR858_06315 (dnaX)
03430 Mismatch repair
SR858_06315 (dnaX)
03440 Homologous recombination
SR858_06315 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dzo03032
]
SR858_06315 (dnaX)
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_06315 (dnaX)
Enzymes [BR:
dzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SR858_06315 (dnaX)
DNA replication proteins [BR:
dzo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SR858_06315 (dnaX)
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SR858_06315 (dnaX)
BRITE hierarchy
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_16
RuvB_N
DNA_pol3_tau_5
AAA_22
AAA_14
AAA_18
AAA_30
AAA_2
Glyco_tranf_2_5
AAA_19
PIF1
AAA_assoc_2
Mg_chelatase
AAA_24
TsaE
nSTAND3
AAA_28
Herpes_Helicase
Herpes_V23
Motif
Other DBs
NCBI-ProteinID:
WQH05947
LinkDB
All DBs
Position
1435963..1438461
Genome browser
AA seq
832 aa
AA seq
DB search
MSYQVLARKYRPKNFETLVGQEHVVRALTHALHSGRLHHAYLFTGTRGVGKTTLSRILAK
SLNCIGPDGNGGITATPCGVCEACTAIDAGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIISHLENILGQEQITFEQPALRLLAAGAHGSMRDALSLTDQAIAYAAGEVTLE
AVQGMLGALDQSYLIRLLDALARQDGADLLAVADEMATRSLSYNGALQDLGTLLHRIALA
QTVPAALPDDLPEYADIVRLAGQFEAEEVQLYYQIAVHGRNELGLAPDEYAGFSMTLLRM
LAFRPGVGGAEGQPAAAPAMSRPAGVAAARAAAGAGSAGTPPARAAANIQASHASVTPQA
VIAGAAAMARNEAPPSVPVPVPAPVPVPAPVPAPAMPVRAPAPAMAPAPGHAPAASAAPA
PSGPVSPARAAINAALEAARAASRPGGSRAQPPAPAPSAAAPAQAPAPAATPAVAPAPHM
RAMAPAAVPPQAPAASHGSPVTAARPAPWEDMPPNDAGGGAAVLEAPARQAAVAPAAPVA
PVVSPSPQYHEEQSSDDDMPSWVTEFSDDSAIAAPMPAALSSPMAPPSTAYASSLPPSAP
SPSSTYGDEQQIVMPARAAAGPLKAPYAYVVTPVPALDWDGNWPAVAAALPLRGVAQQLA
MQAELINCSSDGNAVVFNLRVPIETWRTSGNVEKLTTALSERFGRAVRVDTELGPVWYTA
SAEAQAFRAACQRAAEEIIANDPLVNRMLTEFDAWVVPGSIVPPQPQAAPAA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtcctcgcccgtaaataccgtcccaagaacttcgaaacgctcgtcggc
caggagcacgtcgtgcgcgcgctcacgcacgcgctgcacagcggtcgcctgcaccacgcc
tacctgttcaccggtacccgcggcgtcggcaagaccacgctctcgcgcatcctggccaag
tcgctcaactgcatcggcccggacggtaacggcggcatcaccgccaccccgtgcggcgtg
tgcgaggcgtgcacggcaatcgacgccggccgctttgtcgactatatcgagatggatgcg
gcatcgaatcgcggcgtggacgagatggcgcagttgctggaacaggcggtgtatgcgccg
agcaatgcccgcttcaaggtctatatgatcgacgaggtgcacatgctcaccaaccacgcg
ttcaatgccatgctcaagacgctggaagagccgccagaacacgtcaagttcatcctggcc
accaccgacccgcaaaaaatcccggtgacggtgctgtcgcgttgcctgcagttcaacctc
aagcagatgccgcccggccacatcatcagccacctggaaaacatcctgggccaggaacag
atcacgttcgagcagccggccctgcgcctgctggcggccggcgcgcacggttcgatgcgc
gatgcgctgtcgctgaccgaccaggccatcgcctacgcggccggcgaagtgacgctcgag
gcggtgcagggcatgcttggcgcactcgaccagtcctacctgatccgcctgctcgacgca
ctggccaggcaggacggcgccgacctgctggccgtggccgatgaaatggccacgcgcagc
ctgtcgtataacggcgcgctgcaagatctcggtaccttgttgcaccgcatcgcgctggcg
caaacggtgcctgccgccttgcccgacgacttgcccgaatacgccgacatcgtgcgcctg
gccggccagttcgaggcggaagaagtgcaactgtattaccagatcgccgtgcacggccgc
aatgaactgggcctggcgcccgacgaatacgctggcttctcgatgaccttgctgcgcatg
ctggcctttcggcccggcgtaggcggcgccgagggacaacctgccgctgcgccggcgatg
tcgcgcccggccggcgtggcggctgcgcgcgctgctgccggcgctggttctgccggcacg
ccgccggcgcgggctgctgccaatatccaggccagccacgccagcgtgacgccgcaggcg
gtgattgccggcgcggctgccatggcgcgtaacgaggcgccgccgtcggtgccggtcccg
gttccggccccggttccggtcccggctcctgttccagccccggcgatgccggtacgggcg
ccggcgccagccatggccccggcgcctggccatgcgccagccgccagtgccgcgccggca
ccgtccggtccggtcagtccggcgcgggcggcgatcaacgccgcgctggaagcagcgcgt
gccgcgtcgcgtcccggtggcagtcgtgcgcagccgcctgcgccagcaccgtccgcagcc
gcgccagcacaggctccggccccggccgccaccccggctgtcgcgccagcgccgcatatg
cgtgccatggcgccggcagcggtcccgccgcaggcgccggccgccagccatggcagtccg
gtcactgcggcgcgcccggcgccgtgggaagacatgccgccgaacgatgctggtggcggc
gccgccgtactggaagcgccggcacgccaggcagcagtggcgcctgctgcgccagttgcc
cccgtggtgtcgccatcgccgcaataccacgaggaacagtcgagcgacgacgacatgccg
tcgtgggtcaccgagttttccgatgacagcgccatcgcggcgccgatgcctgccgcgctg
tcgtcgccgatggcgccgccatcgactgcttacgcctcatcgctgccaccgtcggcgcca
tcgccttcgtccacttacggcgacgagcagcaaatcgtcatgccggcccgcgcggcggcg
ggaccgctcaaggcgccgtacgcctacgtggtcacccctgtgcctgcgctcgactgggac
ggcaactggccggcggtggctgccgccttgccgctgcgcggcgtagcgcagcaactggcc
atgcaggccgaactgatcaattgcagcagcgatggcaacgccgtggtgttcaacctgcgc
gtgccgatcgaaacctggcgcacgtcgggcaatgtcgaaaaactgaccacggcgctgtcg
gagcggttcgggcgcgcggtgcgtgtcgataccgagctgggcccggtctggtacacggcc
agcgccgaggcgcaagcgttccgcgctgcctgccagcgggccgccgaagaaattatcgcc
aacgacccgctggtcaaccgcatgctgaccgagttcgatgcctgggtagtgcccgggtcc
atcgtgccgccgcagccgcaagcggcaccggctgcctga
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