Duganella zoogloeoides: SR858_07010
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Entry
SR858_07010 CDS
T09628
Name
(GenBank) rhamnogalacturonan lyase B N-terminal domain-containing protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
SR858_07010
Enzymes [BR:
dzo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
SR858_07010
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
WQH06078
LinkDB
All DBs
Position
complement(1587049..1588812)
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AA seq
587 aa
AA seq
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METNTLRVLTGAAALSLFAGCGGSGSSTSDSNMPAARTLATTTVAGADASNATLANAATF
GLTQDANFYTVDTGAGLVFKIRRTDNGVSTQSAGDIASMIYNGVQYQDQARGTQLNSGFD
YLYNNVSAVAVTATTVGADTIKITVQAGDLTHYYMARRGDPNIYMGTYFTTEPSTLGLAR
FIVRVPIAALPNGPVPSDLRGTNGAIESGDVFGMPNGETRSKHYSNMRLKDWRYIGATSA
TAGLWIVRDNHEGGSGGPFYRSLLNQGTSSNQEITYIINYGEAQTEAFRPGILNTYTMTF
TDGSAPGAIDTSWFAGMGLLGYVPDSGRGGVAGVGIANRDTRYAYTVGFANATAQYYADA
NPSNGYYSSAGMLPGTYTMTVYKNELAVDTRSVTVNAGAVTTLNTITVAGDPSSVTPKWR
IGDWDGTPNEFINGDKLTTMHPQDVRMAAWTVPDYVIGTSTPATGFPAYQWKEVNGNLVI
RFNLKQSEIRAYTLRAGITVGYAGGRPKIAVNGWSSANPAAPNQPKTRTLTVGTYRGNNT
MLTFNIPASELLVGQNILTLTAISGSSGVKYLSPGYAWDAVDLIPTP
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaacaccctgcgcgtcctcaccggcgcggcagcgctgtccctgttcgccggt
tgcggtggcagtggcagcagtaccagcgacagcaacatgccagcggcccgcacgctcgcc
accaccacggtcgcgggcgccgacgccagcaatgccacgctggccaacgccgcaaccttc
ggcctcacccaggacgccaacttctacaccgtcgataccggcgccggactggtgttcaag
atccgccgcaccgacaatggcgtgagcacccagtcggccggcgatatcgcctcgatgatc
tacaacggcgtacagtaccaggaccaggcgcgcggcacccagctgaactcgggcttcgac
tacctgtacaacaatgtctcggcggtggccgtgaccgccaccacggtcggcgccgacacc
atcaagatcaccgtgcaagcaggcgacctcacccactactacatggcgcgccggggcgat
ccgaacatctacatgggcacgtacttcacgaccgaaccgagcacgctgggcctggcgcgc
ttcatcgtgcgggtaccgatcgccgcgctgcccaacggcccggtgccgtccgacctgcgc
ggcaccaacggcgccatcgaatcgggcgacgtgttcggcatgcccaacggcgaaacccgc
tccaagcactattcgaacatgcggctcaaggactggcgctacatcggcgccaccagcgcc
accgccggcctgtggatcgtgcgcgacaaccacgaaggcggctcgggcgggccgttctac
cgcagcctgctcaaccagggcacgtccagcaaccaggaaatcacctacatcatcaactac
ggcgaggcgcagaccgaggcgttccgccccggcatcctcaacacctacaccatgactttc
accgacggcagcgcaccgggcgccatcgatacatcatggttcgccggcatgggcctgctc
ggctacgtgccggacagcggccgtggcggcgtggcgggcgtgggcatcgccaaccgcgac
acgcgctatgcctacacggtcggcttcgccaacgccacggcgcagtactatgccgacgcc
aacccatccaacggttactacagcagcgccggcatgctgcccggcacctacaccatgacg
gtgtacaagaacgagctggcggtggatacccgcagcgtgacggtcaacgccggcgccgtc
accacgctcaataccatcaccgtcgcgggcgacccgagcagcgtcacgcccaagtggcgc
atcggcgactgggacggcacgcccaacgagttcatcaacggcgacaagctcaccaccatg
cacccgcaggatgtgcgcatggccgcctggaccgtgcccgattacgtgatcggcacctcc
accccggccaccggtttcccggcctaccagtggaaggaagtgaacggcaacctggtgatc
cgcttcaatctcaagcagagcgaaatccgcgcctacacgctgcgcgccggcatcacggtc
ggttacgccggcggccgccccaagatcgcagtcaacggctggagctcggccaatccggcc
gcgccgaaccagccgaaaacccgcaccctcacggttggcacctatcgcggcaataacacc
atgctgacctttaacatcccggccagcgagctgctggtgggccagaacatcttgacgctc
acggccatcagcggctcgagcggcgtcaagtacctgagccccggctatgcctgggatgcc
gtcgatctgattccaacaccataa
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