Duganella zoogloeoides: SR858_10210
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Entry
SR858_10210 CDS
T09628
Name
(GenBank) PLP-dependent aspartate aminotransferase family protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo00260
Glycine, serine and threonine metabolism
dzo00270
Cysteine and methionine metabolism
dzo00450
Selenocompound metabolism
dzo00670
One carbon pool by folate
dzo01100
Metabolic pathways
dzo01110
Biosynthesis of secondary metabolites
dzo01230
Biosynthesis of amino acids
Module
dzo_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SR858_10210
00270 Cysteine and methionine metabolism
SR858_10210
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SR858_10210
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SR858_10210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dzo04147
]
SR858_10210
Enzymes [BR:
dzo01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
SR858_10210
Exosome [BR:
dzo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SR858_10210
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WQH06671
UniProt:
A0ABZ0Y5I9
LinkDB
All DBs
Position
complement(2300988..2302163)
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AA seq
391 aa
AA seq
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MNDHLKQALATRVIHAGQAPDPSTGAIMPPIYATSTYVQGSPGVHKGLDYGRSHNPTRWA
LERCVADLEGGAQAYAFASGLAAISTVLELLDAGSHIVAGDDMYGGTYRLFERVRRRSSG
HDFTYVDLTDPANLLAALRPETRMVWVETPTNPMLKLADLRAIAAICRERGIIAVADNTF
ASPLVQRALEHGFDIVVHSATKYLNGHSDVIGGIAIVGGAPHQQGWREQLGFLQNSVGAI
AGPFDSFLILRGVKTLAIRMERHCRSALELATWLEQQPEVRRVFYPGLASHPQHALAQRQ
MDGYGGIISIDLNTGLAGARRFLEHCQVFALAESLGGVESLIEHPALMTHASIPPEQRAQ
LGIGDGLIRLSVGIEDIGDLKADIRRSLDAI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgaccatctcaagcaggcgctggccacccgcgtgatccatgccggccaggcgccc
gacccttccaccggcgccatcatgccgccgatttacgccacgtccacgtacgtccaggga
agcccgggcgtgcacaagggcctcgactacggccgctcgcacaaccccacgcgctgggcg
ctcgaacgctgcgtggccgacctcgaaggcggcgcccaggcgtacgcgttcgcctcgggc
ctggcagcgatttccaccgtgctcgaactgctcgacgccgggtctcacatcgttgccggc
gacgatatgtacggcggcacgtaccgactgttcgaacgggtgcgccggcgcagcagcggc
cacgattttacctacgtggacctcaccgacccggccaacctgctggccgcgctgcgcccg
gaaaccagaatggtgtgggtcgaaaccccgaccaatccgatgctcaagctggccgacctc
agggcgattgcggccatttgccgcgagcgcggcatcattgccgtggccgacaacactttc
gccagcccgctggtgcagcgcgcgctcgagcatggcttcgacatcgtggtccactccgcc
accaagtacctgaacggccactcggacgtgatcggcggcatcgccatcgtcggcggcgcg
ccgcaccagcaaggctggcgcgagcaactgggtttcttgcaaaactcggtcggggcgatc
gccggaccgttcgacagctttttgatactgcgcggggtcaaaacgctggcgatccgcatg
gagcgccattgccgcagcgcgctggaactggccacctggctcgaacagcagcccgaagtg
cggcgcgtattctatccgggcctggcttcgcacccgcagcacgcgctggcgcagcggcaa
atggacggttacggcggcatcatctcgatcgacctgaacaccggcctggccggtgcgcgg
cgttttctcgagcattgccaggtgtttgcgctggccgaaagcctgggcggcgtggagagc
ctgatcgagcaccctgccctgatgacccacgccagcatcccgcccgagcaacgcgcgcag
ctcggcatcggcgacggcttgatacggttgtcggttggaatcgaagatataggggattta
aaggccgatattcggcgctcgctcgatgcgatatag
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