Duganella zoogloeoides: SR858_11610
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Entry
SR858_11610 CDS
T09628
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_11610
Enzymes [BR:
dzo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SR858_11610
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SR858_11610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
WQH06945
LinkDB
All DBs
Position
complement(2601426..2602961)
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AA seq
511 aa
AA seq
DB search
MSAASLKLVLGDQLNCLHSWFRAPDPGVVFVLMEVRQETDYVLHHAQKIIAIFAAMRDFA
RRLRDAGHRVHYLTIDDPDNLQSLPANLDRLLALYGASNFAWQAPDEYRLDRQLAAYAAG
LTIASAMADTEHFYTARHEAAALFDGRTSWVMEHFYRHMRLRHKVLVSDTGKPAGGQWNF
DHDNREAWKGIPWEPADLRESHDHSALWASIEASGAHSFGAPNAADLRWPLNRDEALAQL
ERFVKHALPHFGQYQDAMSFKAWRLFHSLLSFAMNVKMIAPHEVVDRVVQALADGAAPLA
AVEGYVRQILGWREYVRGVYWHRMPGYDQLNTFGHEEPLPHWFWSGDTRMRCLATAIGQS
LEHAHAHHINRLMVIGNFSLLAGLSPQALHGWYLGVYIDAFEWVELPNTLGMSQFADGGL
LATKPYVSSAAYIDKMSDYCKGCHYDKKARTGERACPYNALYWDFFDRNRDRLAGNHRLG
MVYQQLRRMDGPVLDGVREQAARTRASLADL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccgcctcgctcaagctggtgctgggcgaccagctcaactgcctgcacagctgg
ttccgggcgccggaccccggcgtagtgttcgtgctgatggaggtgcggcaggaaaccgac
tacgtgctgcaccatgcacaaaaaatcatcgccatctttgccgccatgcgcgacttcgcc
cggcgcctgcgcgacgccggccaccgggtgcactatctgaccatcgacgatcccgacaac
ctgcaatcgctgccggccaacctggaccggttgctggcgctgtatggcgccagcaacttc
gcctggcaggcgccggacgagtaccggctcgaccggcaactggcggcgtatgcagccggt
ttgaccattgcgtccgcgatggccgataccgagcatttttacaccgcgcgccacgaggcg
gcggcgctgttcgacggccgcaccagctgggtgatggaacacttttatcgccacatgcgc
ctgcgccacaaggtgctggtctcggacaccggcaagccggcgggcggccagtggaacttc
gaccacgacaaccgcgaggcgtggaaaggcatcccgtgggaaccggccgacctgcgcgag
tcgcacgaccacagcgcgctgtgggcgagcatcgaggcatccggcgcgcatagtttcggc
gcgcccaatgcggccgacctgcgctggccgctgaaccgcgacgaagcgctggcgcaactg
gaacgcttcgtcaaacacgcgctgccccacttcggccaataccaggacgcgatgagcttc
aaggcctggcgcctgttccactcgttgctttcgttcgcgatgaacgtgaaaatgatcgct
ccgcacgaggtggtggatcgcgtggtgcaggcactggccgatggcgcggcgccgctggcg
gcggtggaaggctatgtacggcaaatcctcggctggcgcgagtacgtgcgcggcgtgtac
tggcaccgcatgcccggttacgaccagttgaacaccttcggccacgaggagccgctgccg
cactggttctggtccggcgacacgcgcatgcgctgcctggcgactgccatcggccagtcg
ctcgaacacgcgcacgcgcaccacatcaaccgcctgatggtgatcgggaatttttcgcta
ttggccggcctgtcgccgcaggcgctgcacggctggtacctgggcgtgtacatcgacgcc
ttcgaatgggtggaactgcccaacaccctcggtatgagccagttcgccgacggcggcctg
ctggcgaccaagccgtacgtctcgagcgccgcgtatatcgacaagatgagcgattactgc
aaggggtgccattacgacaaaaaggcgcgcaccggcgagcgcgcctgcccgtacaacgcg
ctgtactgggattttttcgaccgcaaccgggatcggttggccggcaaccaccgcctgggg
atggtgtatcagcagctcaggcgcatggatgggccggtgctcgatggggtgcgcgaacag
gcggcgcgcacgcgcgccagcctggccgacctgtag
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