Duganella zoogloeoides: SR858_15180
Help
Entry
SR858_15180 CDS
T09628
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SR858_15180 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_15180 (recD)
Enzymes [BR:
dzo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SR858_15180 (recD)
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SR858_15180 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
SH3_13
Helicase_RecD
AAA_11
AAA_22
UvrD-helicase
PhoH
DEAD
SLFN-g3_helicase
AAA_25
AAA_16
AAA_5
Mg_chelatase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WQH02418
LinkDB
All DBs
Position
complement(3436742..3438715)
Genome browser
AA seq
657 aa
AA seq
DB search
MTPELSAPLLAQVDALTENGRLRRLSGAFARFIASIGGGSPPLMIACVLLSELEGRGHSC
LMLAELAGDPAPLLGLDAEEWAALRAAVAAAGPWPKNVAAWRTLLARCEQVWPVGDLDFQ
QPLVLDGERLYLRRYWRDETQVAHAVRARALGGLVASDADDQTGAVRHWLDILFAPGAHA
DGVDWQKTACAVAMRGKLGIITGGPGTGKTYAVARLLALLFATSGGQESSLRVALAAPTG
KAAARLKQSIDVALAGLDHRVRAVMPQRELGAARTLHSLLGARPDTRAFRHHAGNQLDVD
VLIVDEASMIHLEMMAALLAALPSTATLILLGDKDQLASVEAGAVLGDLCHHAEAGGYDA
ETLSYVQASTGQQLPEQYAGRAGPIAQQTVMLRESRRFGGPIGALALAVNGGDAAGAVRI
LRAGEEKKVAWTDPALPGDLLQLSLAGRDGAPGGYRDYLRLVEQGPAGNDPGDHLAWVQA
VLKSFETFRILCAVRDGEWGVSGLNEAIEKRLQAAGLLRRTGEWYVGRPVMVTRNDYGTG
VFNGDIGLTLPDPARPGALRVYFSEGDTVRSVLATRLRNVDTAFAMTVHKSQGSEFRHTV
LVLPKDGGGVLARELIYTGITRAREFFTLLTPNGQVLLEAIAQRTQRASGLRDLLER
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgaattatccgcaccactgctggcccaagtcgatgcgctgaccgaaaacggc
cggctgcggcgcctgagcggagcttttgcccgctttatcgcctcgatcggcggcggctcg
ccgccactgatgatcgcctgcgtgctgttgtccgaattggaagggcgcggccacagctgc
ctgatgctggccgaactcgctggcgacccggcgccgctgctggggctggacgccgaagag
tgggcggcgctgcgcgcggcagtggccgctgccgggccgtggccgaaaaatgtcgccgcc
tggcgtacgctgctggccaggtgcgagcaggtatggccggtgggcgacctcgatttccag
caaccgctggtgctcgacggcgaacgcctgtacctgcgccgctactggcgcgatgaaacc
caggtggcgcacgcggtgcgcgcccgggcgctgggcggcctggtcgccagcgacgccgac
gaccagaccggggccgtgcgccactggctcgacatcctgttcgcaccgggcgcccacgcg
gacggcgtggactggcaaaagaccgcctgcgcggtggccatgcgcggcaagcttggcatc
atcaccggcggacctggcaccggcaagacgtatgcggtggcgcgcttgctggcgctgctg
tttgccaccagcggcggccaggagtcgagcttgcgggtagcgctggccgcgcccaccggc
aaggcggcggcgcgcctgaaacagtcgatcgacgtggcgctggccggcctggaccatcgc
gtgcgggcggtgatgccgcagcgcgaactgggcgccgcgcgcaccttgcacagcctgctc
ggcgcccggcccgatacgcgcgccttccgccaccatgccggcaaccagcttgacgtcgat
gtgctgatcgtcgatgaagcgtcgatgattcacctcgaaatgatggcagcgctgctggcg
gcgctgccgtccaccgccaccctgatcctgcttggcgacaaggatcagctggcgtcggtg
gaggcgggcgccgtgctgggagatctgtgccatcacgccgaggccggcggctacgatgcg
gaaaccttgtcgtatgtgcaagcgagtaccggccagcagttgcccgagcaatacgcgggg
cgtgccggtccgattgcccagcaaaccgtgatgctgcgcgaaagccgccgcttcggcggt
ccgatcggcgcgctggcgctggccgtcaacggcggcgatgcggccggtgcggtgcgcatc
ctgcgcgcgggcgaagagaaaaaagtggcctggaccgatccggcgctgccgggcgacctg
ctgcaactgtcactggccggccgcgacggcgcccctggcggctaccgcgattacctgcgg
ctggtcgagcagggccctgccggcaacgaccccggcgaccacctcgcatgggtgcaagcg
gtgctgaaatcgttcgagaccttccgcatcctgtgcgccgtgcgcgacggcgagtggggt
gtctccggcttgaacgaggccatcgaaaagcgcttgcaggcggccggactgttgcgccgt
accggcgaatggtacgtcggacggccggtcatggtcacccgcaacgactacggcaccggc
gtgttcaacggcgacatcggcttgaccttgcccgacccggcccggcccggcgcgctgcgc
gtgtatttctcggaaggagataccgtgcgcagcgtgctggccacgcggctgcgcaacgtc
gatacggcatttgccatgaccgtgcataagtcgcaaggctcggagttccggcacacagtg
ctggtgctgccgaaagatggcggcggggtgctggcgcgcgagctcatttataccggcatt
acccgcgcccgggagttcttcacgttgctgacgccgaacgggcaagtcttgctcgaagcg
atagcgcagcgcacgcagcgggccagtggattgagggatttgctggagaggtaa
DBGET
integrated database retrieval system
