Duganella zoogloeoides: SR858_15190
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Entry
SR858_15190 CDS
T09628
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SR858_15190 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_15190 (recC)
Enzymes [BR:
dzo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SR858_15190 (recC)
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SR858_15190 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF7623
Motif
Other DBs
NCBI-ProteinID:
WQH02420
LinkDB
All DBs
Position
complement(3442569..3446054)
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AA seq
1161 aa
AA seq
DB search
MHSSITPGLLILHGNQMEQLRAAVFQWLHNHPLGPLEPETFLVQSNGVAEWLKIALAEEM
RVCAATRVALPARFLWETYRGMLGRDRVPRRSAFDKGPLTWRLMRLLPTLLADPVFAPLR
HFLADGEAERRLQLAERLADLFDQYQVYRADWLDDWAGGRDQLRCARGDIIALPPEQRWQ
GQLWRAVIDDVEPHERALGRATVHTEFVRASAAGELPLGRLPRRIVIFGVSALPYQTLEA
LATLARHTQVVLAVPNPCRYYWGDIIEGRDLLRSAYRRQQLRNGQDLGALPLEELHAHSH
PLLASWGRQGRDFIRMLDEFDEAAAHAAAASGDDDAVTPLRVDLFGDEDGGTLLAQVQAA
VRDLLPLSEHPHVPPGAADRSIEFHVTHSVQREVEVLHDQLLQMFAATPDGGTPLRPRDV
VVMVPDIDTFTAAIHAVFAQHRRSDPRYIPFEIGDVNDRSVNPLLVALEWLLRLPQQRCR
QSEIRDLLDVPALAARFGLGDDDLATLGQWIEGSGVRWGLDIEHRSGLGLGSAGEQNAWI
FGVRRMLLGYASGGGGGGATASFAGIEPYGEVGGLDAALAGSLAQMVESLLHWRAALAQA
RTPADWGVQARALMAAFFKAGEEGDRLTLAQLDDALNNWLETCDSAQFQEEVPLAVLREA
WLGLMDEPTLNHQFVSGGVTFCTLMPMRAVPFRVVCLLGMNDGDFPRRAPKADFDLLALP
GMARPGDRSRRDDDRYLMLEAVLAAREKLYISWVGRNVRDNSEQPPSVLVSQLCDYLKAG
WNMTLAERTTEHALQPFSRRYFERDGLLTYAREWRAAHDVDYADEADADAPADVLPPFAL
DEKYRLKLGALAGFLLQPVRYFFRERLAVVFGEAAQLGDDEEPFSFNALERYLLEDTMLD
NDADTEQLDEIHDKLTERAEQLAREGVLPIGLIGRQYQRQLVTSLAPVRHAWLTLRQRYS
KPAAKLALSLDLGPVQLDDWLDQLRSDGAQTVWLMQLSSRVADKQGKARGDKLIAMWVRQ
LAAAAAGLSVTGYLVARDMVVTMAPLDRDEALQALRVLAAWWRDGMDRPLPTACKTALAL
VGDGGDGGSGENKANARTAYDGSFELQGENQDLCLARLWPDYSALSAQPDFERVSQELYG
PLARWLEQCITMTPIDGEDAA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgcattccagcatcacccccggcctgttgattttgcacggcaaccagatggagcagctg
cgcgcggccgtgttccagtggttgcacaaccatccgctggggcccctggagccggaaacc
ttcctggtgcaatcgaacggcgtggccgagtggctcaagatcgcgctggccgaggaaatg
cgcgtgtgcgccgccacccgcgtggcgctgccggcgcgcttcctgtgggagacctatcgc
ggcatgctggggcgcgaccgcgtcccccggcgctccgcgttcgacaagggcccgctcacc
tggcgcctgatgcgcctgttgcccacgctgctggccgacccggtctttgcgccgctgcgc
cacttcctggccgacggcgaggccgaacgccggctgcaactggccgaacggctggccgac
ctgttcgaccagtaccaggtgtaccgcgccgactggctcgacgactgggccggcggccgc
gaccagctgcgctgcgcccgtggcgacatcatcgcattgccgcccgagcagcgctggcag
ggccagttgtggcgcgcggtgatcgacgacgtcgaaccgcacgaacgcgcattgggccgc
gccaccgtccacaccgaattcgtgcgcgccagcgcggccggcgaactgccgctgggccgc
ctgccacgccgcatcgtcatcttcggcgtctcggcgctgccgtaccagacgctcgaagcg
ctggccacgctggcgcgccacacccaggtggtgctggccgtgcccaacccgtgccgctac
tactggggcgacatcatcgagggccgcgacctgctgcgctccgcgtaccgtcgtcagcag
ctgcgcaacggccaggacctgggcgcgctgccgctcgaagagctgcacgcccacagccat
ccgctgctggccagctgggggcgccagggccgcgacttcatccgcatgctcgacgaattc
gacgaagcggcggcccatgccgcagccgcttccggcgatgacgacgcggtgacaccgctg
cgcgtggacctgttcggcgatgaggacggcggcacgctgctggcccaggtgcaggccgcc
gtgcgcgacctgctgccgctgtccgagcacccgcacgttccgcccggtgcggcggaccgc
tcgatcgaattccacgtcacccacagcgtgcagcgcgaggtcgaggtgctgcatgaccag
ctgctgcaaatgtttgcggcgacgccggacggcggcacgccactgcgcccgcgcgacgtg
gtggtgatggtgcccgacatcgacacctttaccgccgccatccacgccgtgttcgcccag
caccgccgcagcgacccgcgctacattccgttcgagatcggcgatgtcaacgaccgcagc
gtcaatccgctgctggtcgcgctggagtggctgctgcggctgccgcagcagcgctgccgc
cagagcgaaatccgcgacctgctcgacgtgccggcactggcggcgcgcttcggcctcggc
gacgacgacctggccaccctgggccagtggatcgaaggctcgggcgtgcgctggggcctc
gatatcgagcaccgcagcgggctgggactcggctccgccggcgaacagaatgcctggatt
ttcggcgtgcgccgcatgctgctcggttacgccagtggcggcgggggcggtggcgccacc
gccagctttgccggcatcgaaccatacggcgaagtgggcggcttggacgccgcgctggcc
ggttcgctggcgcaaatggtggagtcattgctgcactggcgcgcggcgctggcgcaggcg
cgcacgcccgccgattggggcgtgcaggcgcgcgcgctcatggcggcgttcttcaaggcc
ggcgaggagggcgaccgcctcacgctggcgcaactggacgatgcgctcaacaactggctg
gaaacctgcgacagcgcgcagttccaggaggaagtgccgctggcggtgctgcgcgaagcg
tggctcgggctgatggacgagcccacgctgaaccaccagttcgtctccggcggcgtcacc
ttctgcaccctgatgccgatgcgcgcggtgccgttccgcgtggtgtgcctgctgggcatg
aacgacggggacttcccgcgtcgcgcccccaaggccgacttcgacctgctggcattgccc
ggcatggcgcgcccgggcgaccgttcgcgccgcgacgacgaccgctacctgatgctcgaa
gccgtgctggctgcgcgcgaaaagctgtatatcagctgggtgggccgcaatgtgcgcgac
aacagcgagcagccgccatcggtgctggtctcgcaactgtgcgactacctgaaagccggc
tggaacatgacattggcagagcgcaccaccgagcacgcgctgcaaccgttcagccgccgc
tatttcgagcgcgacggcctgctcacgtacgcgcgcgaatggcgggcggcgcacgacgtt
gactatgccgacgaggcggacgccgatgcgcccgccgacgtgctgccaccgttcgcgctg
gacgaaaaataccgccttaagctcggcgcactggcgggctttctgctccagccggtgcgc
tacttcttccgcgaacgcctggccgtggtgttcggcgaggcggcgcagctgggcgacgac
gaggaaccgttctcgttcaatgcgctcgagcgctacctgcttgaagacaccatgctcgac
aacgacgccgacaccgagcagctcgacgaaatccacgacaagctcaccgaacgcgccgaa
cagctggcgcgcgaaggcgtgctgcccatcggcctgatcggccgccagtaccagcgccag
cttgtcacttcgctggcgcccgtgcgccatgcgtggctgacgctgcgccagcgctacagc
aagccggccgccaagttggcgctgagcctggacctgggtccggtgcagctcgacgactgg
ctcgaccagctgcgcagcgatggcgcccaaaccgtgtggctgatgcagctgtcctcgcgc
gtggctgacaagcagggtaaagcccgtggcgacaagctgatcgcaatgtgggtgcgccag
ctggcggccgccgctgccgggctgtccgtgaccggttacctggtggcgcgcgacatggtc
gtcaccatggcgccgctggaccgcgacgaagccttgcaggcgctgcgcgtgctggcggcg
tggtggcgcgatggcatggaccgtccgttgcctaccgcctgcaagacggcgctggcgctg
gttggcgacggtggcgatggcggtagcggggagaacaaggccaacgcccggaccgcatac
gacggcagcttcgaactgcagggcgaaaaccaggacctgtgcctggcgcgcctgtggccc
gattacagcgccttatcggcgcagccggatttcgaacgcgtgtcgcaggaactgtacgga
ccgctggcgcgctggctcgagcaatgtatcaccatgacgccgatcgacggcgaggacgca
gcatga
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