Duganella zoogloeoides: SR858_15925 Help Entry SR858_15925       CDS       T09628                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism dzo  Duganella zoogloeoides Brite KEGG Orthology (KO) [BR:dzo00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dzo03400]     SR858_15925 Enzymes [BR:dzo01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      SR858_15925     5.6.2.6  RNA 3'-5' helicase      SR858_15925 DNA repair and recombination proteins [BR:dzo03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     SR858_15925 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr WH4_Lhr DEAD Helicase_C WH3_Lhr ResIII Cas3-like_C_2 MarR MarR_2 DprA_WH PhoH Fe_dep_repress HTH_IclR AAA_25 Motif Other DBs NCBI-ProteinID:  WQH02563 LinkDB All DBs Position 3621498..3625895 Genome browser AA seq 1465 aa AA seqDB search MTRPALHDWQDFHPAVAAWFGATFPAATEAQRRAWPLIQAGRPTLIAAPTGSGKTLTAFL AAIDALVRESGAGPLPDVTRVLYVSPLKALSNDIRVNLLAPLEGITAQLQAMGLPPHGIR SAVRTGDTTQAERNAMRRRAPHILVSTPESLYVLLGSDSGRAMLAGVRTVIVDEIHAVAG SKRGSHLSLSLERLEALCETPPVRIGLSATQKPLSTVAHFLAGTGADCAVVDVGHVRARD LGLELPPVPLEAVMPNEVWERVYDKLAELTVLHRTTLVFVNTRRMAERMARHLADRLGGE HVAAHHGSLAKEYRLDAEQRLKRGDLRVLVATASLELGIDIGDVDLVCQIGSPRSIAAFL QRVGRSGHHVGGLPKGRLFPTSRDDLVECAALLDCVRRDELDILHVPVAPLDVLAQHIVA EVASREWREDDLFALMRQAWPYAPLVRDRFDAVLRMLSEGYTTRQGVRGAYLHRDTVSGT VRGRRGGKLTAVTSGGTIPDNADYSVLLEPQGISIGTVHEDFAVESLAGDVFQLGNTSYR IQRIDAGKVRVEDAHGAAPNIPFWIGEAPGRSDELSFGVARLRGEICRLLGRAEGESGAA ALERAIDWLHEHLGLNDDAARQIVDYLARARSALGALPTHDTLVMERFFDESGGMQLVLH TPYGSRINRAWGLALRKRFCRNFNFELQAAATEDAIVLSLSESHSFPLDEVWRYLRAATA EQVLVQALLDAPLFNVRWRWNATTALALPRYAGGRKVAPQLQRMKSDDLLAAVFPDQAAC LENIVGERELPSHPLVDQTLDDCLHEAMDSEGWLALLRRMEAGEVRLLARDLPAPSPLAM EILNARPYAFLDDAPLEERRTQAVLNRRWTDPASTDDLGALDAGAIEAVAQEAWPDVRSS DEMHEALVALAAITQDEASANAGWAGWLQTLVAGGRATLLADGDTQLWVALERLACLQAA YPHALATPLLAPPPAHLDDEAWTRDSALVELLRARQGGFGPQTIAAIAAPLGLHASTATI ALTRLESEGYVMRGRFTPGAEDEEWVERHLLARIHRYTIKRLRREIEPVERQDFMRFLFD WQHLSEGNQLSGQDALAQILAQLEGYEAAAGGWESDLLALRVDDYSNTWLDDLCRAGKIV WTRVGAPASAAGGPVRGTPLVLLPRRQLALWHALPAVAGEITVSARAARVLAALRSEGAM FFDELARDARLLGAELETALGELVATGLVNADSYAGLRAMLAPAARRNALDKRRRRGMVG AGPAMEEAGRWALVRRTDGVTIVERPSEIAAAGDPVSAIAAKKPAPPARRPRTDPDTLEH IAMTLLRRYGVMFWRLLEREASWMPAWRELLPVYHRLEARGDIRGGRFVAGLSGEQFALP EAIPLLRDMRRRPHDGAYVCLSGIDPLNLCGTLLPGDKVPALAGNRILFRDGLPVAMQTG SKLRYIGNPEPVERELLRAHLLTNS NT seq 4398 nt NT seq  +upstreamnt  +downstreamnt atgacccgacccgccctccacgactggcaagacttccaccccgccgttgccgcgtggttt ggcgcgaccttccccgccgccaccgaggcccagcgccgcgcctggccgctgatccaggct ggccgccccaccctgatcgccgcgcccaccggctcgggcaaaacgctcaccgccttcctc gctgccatcgatgcgctggtgcgcgagagcggcgccggcccgctgcccgatgtcacacgg gtgctgtacgtttcgccgctgaaggcgttgtcgaacgatatccgcgtgaacctgctcgcg ccgctggagggcataaccgcgcagttgcaggcgatgggactgccgccgcacggcatccgc agcgccgtgcgcaccggcgacaccacccaggccgaacgcaatgccatgcgccgccgcgcg ccgcacatcctggtatccacgcccgaatcgctgtacgtcctgctcggttccgacagcggc cgcgccatgctggccggcgtgcgcacggtgatcgtcgatgaaatccacgcggtagccggc agcaaacgtggcagccacctgtcgctgagcctggagcggctcgaggccttgtgcgagacg ccgccggtgcgcatcggcctgtcggccacgcaaaaacccttgtccaccgtggcgcatttc ctggccggtaccggcgcggattgcgcggtggtggacgtgggccacgtgcgtgcgcgcgac ctggggctggaactgccgccggtgccgctggaagcggtaatgcccaacgaagtgtgggag cgcgtgtacgacaagctggcggaactgaccgtcctgcaccgcaccacgctggtgttcgtc aatacgcggcgcatggccgagcgcatggcacgccacctggccgaccgcctgggcggcgaa cacgtggccgcacaccacggcagcctggccaaggaataccggctcgatgccgagcagcgc ctcaagcgcggcgatttgcgggtgctggtcgctactgcctcgctggaactgggcatcgac atcggcgacgtggacctcgtttgccagatcggctctccgcgcagcattgccgccttcctg cagcgcgtgggccgctcgggccaccacgtgggcgggctgcccaagggacggctgtttccc acgtcgcgcgacgacctggtggaatgcgcggcgctgctcgactgcgtgcgccgcgacgaa ctcgatatcctgcatgtgccggtggcgccgctcgatgtgctggctcagcacatcgtggcc gaagtggccagccgcgaatggcgcgaggacgacctgttcgccctgatgcgtcaggcctgg ccctacgcccccctggtccgcgaccgtttcgacgccgtgctgcgcatgctctcggaaggc tacaccacgcgccagggcgtgcgcggcgcctacctgcacagagataccgtgagcggcacc gtgcgcggacggcgcggcggcaagctcaccgccgtcacctcgggcggcaccattcccgac aatgcggattattcggtgctgctcgaaccgcagggcatctcgatcggcaccgtgcacgag gacttcgcggtcgaaagtctggccggcgacgttttccagctcgggaacacgtcgtaccgc atccagcgcatcgacgccggcaaggtgcgggtggaagacgcccacggcgccgcgcccaac atcccgttctggatcggcgaggcgccgggccgcagcgatgagctgtcgttcggcgtggcg cgcctgcgcggcgagatctgccggctgctgggccgtgccgagggcgagtccggcgcagcc gcattggaacgcgccatcgactggctgcacgaacacctggggctgaacgacgacgccgcg cgccagatcgtcgattatctggcccgcgcccgctccgccctgggcgcactgcccacccat gacacgctggtgatggagcgctttttcgacgagtcgggcggcatgcagctggtgctccat acgccgtacggcagccgcatcaaccgcgcctggggcctcgccttgcgcaagcgcttctgc cgcaatttcaatttcgaattgcaggccgccgccaccgaagacgccatcgtgctgtcgctg tccgagagccacagcttcccgctcgacgaggtatggcgctacctgcgcgccgccaccgcc gagcaggtcctggtgcaggcgctgctcgacgcgccgctgttcaacgtgcggtggcgctgg aacgccaccaccgcgctggccctgccgcgttacgccggtggacgcaaggtcgcgccacag ctgcaaagaatgaaaagcgacgacctgctcgctgccgtgttccccgaccaggcggcgtgc ctggaaaatatcgtcggcgaacgcgaactgccgagccacccgctggtggaccagacgctg gacgactgcctgcacgaagcgatggacagcgaaggctggctggccctgctgcggcgcatg gaggcgggcgaggtacggctgctggcccgcgacctgccggcgccgtcgccgctggcgatg gaaatcctcaacgcccgcccttacgcctttctggacgacgcgccgctggaagagcgccgc acccaggcagtgctcaaccgccgctggaccgaccccgcctccaccgacgacctgggcgcg ctggacgctggcgccatcgaggcggtggcacaggaagcgtggcccgatgtacggagcagc gacgagatgcacgaggcgctggtcgccctggccgccattacgcaggacgaggccagcgcc aacgccggctgggccggctggctgcaaacgctggtggccggcggacgcgccacgctgctg gccgatggcgacacgcagctgtgggtggcgctcgaacggctggcctgcctgcaagcggcg tatccgcatgccttggccacgccgctactggcgccgccaccggcccaccttgacgacgaa gcgtggacccgcgacagcgcgctggtggaactgctgcgcgcgcgccagggcggcttcggc ccgcaaaccatcgccgccatcgccgccccgctgggtttgcatgcatcgacagcgaccatc gcgctcacccggctggagagcgaaggctacgtcatgcgcggccgcttcacgcccggtgcg gaggacgaggaatgggtggaacgccacctgctggcgcgcatccaccgctacaccatcaag cggctgcggcgcgagatcgagccggtcgagcgccaggacttcatgcgcttcctgttcgac tggcagcacctgtccgaggggaaccagctcagtggtcaggacgcgctggcgcagatcctg gcgcagctcgaaggctacgaggcggcggcaggcggctgggaaagcgacctgctggccttg cgcgtggacgactattcgaacacctggctcgacgacctgtgccgcgccggcaagatcgtc tggacccgcgtgggcgccccagcttccgccgccggcggcccggtgcgcggcacgccgctg gtgctgctgccccgccgtcaactggcgctgtggcacgcgctgccggcggtggccggcgag atcaccgtatcggcccgcgctgcgcgggtgctggctgcgctgcgcagcgaaggcgcgatg ttcttcgacgaactggcgcgcgacgcccgcctgctcggtgcggagctggaaaccgcgctg ggcgaactggtggccacgggcctggtcaatgccgacagctatgccggcctgcgcgccatg ctggcgccggcagccaggcgcaacgcgctcgataagcgccgccggcgcggcatggtgggc gccgggccggcgatggaagaagccggccgctgggcgctggtgcgccgcaccgacggcgtc accatcgtcgaacggcccagcgagatagccgccgccggcgatcccgtgtcagccatcgcc gcgaaaaagccggcgccgccggcgcgccggccacgcaccgatcccgacacgctcgagcac atcgccatgaccttgttgcgccgttacggcgtgatgttctggcgcctgctcgagcgcgag gcgtcgtggatgccggcctggcgcgaactgctgcccgtctatcaccggctcgaagcacgc ggcgacatccgtggcgggcgcttcgtggccggactgtcgggggaacagttcgcgctgccc gaagcgattccgctgctgcgcgacatgcggcgccgtccgcacgatggcgcctacgtgtgc ctgtccggcatcgatccgctcaacctgtgcggcaccctgctccccggcgacaaggtgccg gcgctggccggcaaccgcatcctgttccgcgacggcctgccggtggccatgcaaaccggc agcaagctgcgctacattggcaacccggaaccggtcgaacgcgagctgctgcgcgcgcac ctgctgaccaatagttag

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