Duganella zoogloeoides: SR858_16990
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Entry
SR858_16990 CDS
T09628
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_16990
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SR858_16990
Archaeal homologous recombinant proteins
SR858_16990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WQH02763
LinkDB
All DBs
Position
3861040..3862281
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AA seq
413 aa
AA seq
DB search
MRLLHTSDWHLGQSLHNFERHYEHQRFLDWLLDTIVAERADALLIAGDIFDNANPSSASQ
KQLYRFLQRAKERMPHLNLVVVGGNHDSPGRLEAPGPLLEAHGTRVIGAVQRHADGAIDL
EALVLPLTGADGAVQAWCLAVPFLRPGDVPRKAADAETADSAADPYLAGIALLYKQALDL
ALTKRQPGQAIVAMGHCHMVDGQMSADSERRIVIGGTEMLPAGIFDPAIAYAALGHLHLA
QAVGKQHHIRYCGSPIPLSFAEVGYQHQVLRIDLDGDAVREIAPIAIPRAVQLLRVPAKP
ALIGQVLEELAALDVPDAPTEEQPFLEVRVRLDAPEPGLRARIEAALDGKPVRLAKIETS
SAARGSVLDAEVMTLDRLEQLKPDDIFRQLYQQRFGNEAPPDQLSAFAELMLP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgctgcacacctccgactggcacctcggccaatccctgcacaatttcgaacgt
cactacgaacaccagcgtttcctcgactggctgctcgacaccatcgtagccgagcgcgcg
gacgcgctcctgatcgccggcgacatcttcgacaacgccaatccctcgtcggcctcgcaa
aagcagctgtaccgcttcctgcagcgcgccaaagaacgcatgccgcaccttaacctggtg
gtcgtgggcggcaaccatgattcgccgggccgcctcgaagcgcccgggccgctgctcgaa
gcgcacggcacccgcgtgatcggcgccgtgcagcgccacgcggacggcgccatcgacctg
gaagccctggtgctgccgctcaccggcgccgacggggcggtgcaggcgtggtgcctggcc
gtgccgttcctgcgccccggcgacgtgccgcgcaaagctgccgacgccgaaaccgccgac
agcgcggccgatccctacctggccggcatcgccctgctctacaagcaggcactggacctg
gcgctgaccaagcgccagcccggccaggccatcgtcgccatgggccattgccacatggtc
gatggccagatgtcggccgactccgaacgccgcatcgtcatcggcggtaccgagatgctg
ccggccgggatcttcgatcccgccatcgcctacgcggccctgggccatttgcacctggcg
caggcggtgggcaaacaacaccacatccgctattgcggcagcccgattccgctgtcgttt
gccgaggtaggctaccagcaccaggtgctgcgcatcgacctcgatggcgacgcggtgcgc
gaaattgcgccgattgccatcccgcgcgcggtgcagctgctgcgggtgccggccaagccg
gcattgatcggccaggtgctggaagaactggccgctcttgacgtgccagacgcgcctacc
gaagaacaaccgttcctggaagtgcgggtacggctcgacgcacctgaacccggcctgcgc
gcgcgcatcgaagcggcgctggacggcaagccggtgcgcctggcaaagatcgagacgtcg
agcgcggcgcgcggctcagtgctcgatgcggaagtgatgacgctcgaccgcctggaacag
ctgaaacccgacgacatcttccgccagctctaccagcagcgcttcggcaacgaggcgccg
cccgatcagttgagcgcctttgcggagttgatgctgccatga
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