KEGG   Duganella zoogloeoides: SR858_18195
Entry
SR858_18195       CDS       T09628                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
dzo  Duganella zoogloeoides
Pathway
dzo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dzo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SR858_18195 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dzo02044]
    SR858_18195 (tssM)
Secretion system [BR:dzo02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   SR858_18195 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Phage_holin_3_6 HBM Peptidase_M56 DUF6023 LPG_synthase_TM MdcG_N DUF3301
Other DBs
NCBI-ProteinID: WQH02987
UniProt: A0ABZ0XUN0
LinkDB
Position
complement(4118549..4122325)
AA seq 1258 aa
MRRFWNYITDARRLTIAGLIAMAALFYLGAEVLELALIWALGATVLMLLVAGGLWWWRRR
RARGDAEQLAQAIAAPVSAETIQRDQSLEEVKAIREGLLKAIDTIKGSRLGIVSGARALY
ELPWYMIIGNPAAGKSTAITNSGLQFPFADGKVVQGVAGTRNCDWFFTPDGILLDTAGRY
SVMDEHRAEWFGFLDLLKKYRRRAPINGILIAVSIAELRGDDPEAGIQLARGLRKRVQDL
IERLEIFAPVYVVFTKADLVAGFGEFFAQAERAERERVWGATMPYKRKNASQQILAFFDQ
TFDELCDGLKALSIANMGQQRRDRMEPGVFTFPLEFSTLRTPLRAFLAALFEENPYQFKP
LFRGYYFTSALQEGLPVSAQSQRVAQRFGLQAPQQGAHDRTATGHSGFFLFNLFRNVIFA
DKDLVSQYASRHKVRLTYAVFFTAMLLLGGALGGWGWSYLGNRQLVSNVQADLDQVIKLQ
QGRLDLQSRLEALAILQDRIEQLERYRDERPWSLRMGLYQGELLEQKLRAEYFAGVKEVM
VRPVVASLEELLTAMNTHADQLRAPGAAAPGAEAPGAAAPAATEAAQFQQASAVNVDDAY
NALKTYLMLADKSHAEPGHLNDQLTRYWRGWLENQRGAMSREQMIQAAERLLTFYLAQVA
DPAWPRIEPKLALVDQSRDHLRRVVRGMPARERVYADIRARANTRFPAMTVSRMVGEQDQ
ALVAGSHAIAGAYTREAWEKYVQPAFREAAARELQSTDWVLKSATRDDLTLEGSPEQIQK
GLTDLYKADYAREWQKFVTGVTIANLDGFDAAVVAMNRLGDPQSSPIAKLLTTIDQQTSW
DNPSVMSAELKAAQSGFVNWIKNRVLSRGPSQVNVNLQLPQAGDQPMGPIGREFAGVAKL
LAARDKDASLLGGYLQTLSKLRGRLNQLKNQGDPGPGARQFMQQTLEGTGSELADALRHV
DEQMLNGMSDSQKQAIRPLLVRPLMQTFAVLIAPAEAEINKTWLAQVVEPFRQTLADKYP
FAPNGRTEAAGADIARVFGPDGLVARFATTAMGPLVVRRGDVLAPRTWADMGIALAPQTA
TRFAGWIAPLNGAGGADTPPQTVFQIQPMPAPGALEYVVDIDGQQLRYRNTPPQWAHMVH
PGPTGAEGARITATSVDGRSVDVFNQPGPQGLKMMIDAAAKQRREGGVFELRWTTGTVTV
AMGLKIISSPESGNDDPEPPAPLQRFKGMQLPETVVGAGTVAGGSTAVAAIAAAGTAP
NT seq 3777 nt   +upstreamnt  +downstreamnt
atgcgacgattctggaactacatcaccgatgcccgccgcctgacaattgccggtctgatc
gcgatggcggcgctgttctacctgggcgccgaagtgctggagctggcgctgatctgggcc
ctgggcgccaccgtgctgatgctgctggtcgccggtggcttgtggtggtggcgccggcgc
cgcgcgcgcggcgacgccgaacaactggcgcaggccatcgccgcgccagtgtctgcggag
accatccagcgcgaccagtcgctcgaagaagtaaaagccattcgcgagggcctgctcaag
gccatcgacaccatcaagggctcgcgcctgggcatcgtctccggtgcgcgcgcgttgtac
gagctgccgtggtacatgatcatcggtaatccggcagccggcaaaagcacggcgatcacc
aactcgggcctgcagttccccttcgccgatggcaaggtggtgcagggcgtcgccggcacc
cgcaactgcgactggttcttcacgccggacggcatcctgctcgacaccgccggccgctac
tcggtgatggacgaacaccgcgccgagtggttcggctttctcgacctgctgaaaaaatac
cggcgccgcgcgccgatcaacggcatcctgatcgcggtcagcatcgccgagctgcgcggc
gatgatcccgaggccggcatccagctcgcacgcggcctgcgcaaacgggtgcaggacttg
atcgaacggctggagatattcgcacccgtgtacgtggtgttcaccaaggccgacctggtt
gccggcttcggcgaatttttcgcccaggccgaacgggcggagcgcgaacgcgtctgggga
gccaccatgccgtacaagcgcaagaatgccagccagcagatactggcgttcttcgaccag
accttcgacgaattgtgcgacggcctcaaggcgctctcgatcgccaacatgggccagcag
cggcgcgaccgcatggagccgggcgtgttcacgttcccgctcgaattctccaccttgcgc
acgccgctgcgggccttcctggccgcgctgttcgaggaaaacccgtaccagttcaaaccg
ctgtttcgcggctattacttcaccagcgcgctgcaggaaggcttgccggtcagcgcgcag
tcgcagcgcgtggcgcagcgctttggattgcaggcgccgcagcagggcgcccatgaccgc
accgccaccggccactcgggcttcttcctgttcaacctgttccgcaacgtcatcttcgcc
gacaaggacctggtatcgcagtacgccagccgccacaaggtgcgcctgacgtacgcggtg
tttttcacggcaatgctgctgctgggcggggcgctgggcgggtggggctggtcgtacctg
ggcaaccgccaactggtgagcaatgtgcaggcggacctggaccaggtaatcaagcttcaa
cagggccgcctcgatttgcagtcgcggctggaggcgctggcgatcctgcaggaccgcatc
gaacaactggaacgctaccgcgacgagcgtccctggtcgctgcgcatggggctgtaccag
ggggagctgctcgagcagaagctgcgcgccgagtattttgcaggcgtcaaggaggtgatg
gtcaggccggtggtggccagcctggaagaactgctgacggcgatgaacactcacgccgac
caattgcgcgcgccgggcgccgcagcaccgggtgccgaagcaccgggtgccgcagcaccc
gctgccacggaggcggcgcagttccagcaggcgtctgccgtcaacgtggacgacgcctac
aacgcgctgaaaacctatttgatgctggccgataaaagccacgcggaaccgggccacctg
aacgaccagctcacgcgttactggcgcggctggctggagaaccagcgcggcgccatgtcg
cgcgagcagatgattcaggcggccgagcggctgctgacgttttacctggcgcaggtggcc
gatccggcgtggccgcgcatcgagccgaagctggcgctggtagaccagtcgcgcgaccac
ctgcggcgcgtggtgcgcggcatgccggcgcgcgaacgcgtatatgccgacatccgcgcc
cgcgccaatacccgcttcccggcgatgacggtgtcgcgcatggtgggagagcaggaccag
gcgctggtggccggcagccacgcgattgccggcgcctacacccgcgaggcgtgggaaaaa
tacgtgcagccggcgttccgcgaagcggctgcgcgcgagctgcaaagtaccgactgggtg
ctcaagagcgccacccgcgacgacctcacgctcgaaggcagcccggagcaaatccagaaa
ggcctcaccgatttatacaaggccgactacgcgcgcgaatggcaaaaattcgtcaccggc
gtcaccatcgccaacctcgatggttttgacgccgctgtcgtcgccatgaaccggctcggc
gatccgcagtcgtcgccgattgcgaaacttctcaccacgatcgaccagcaaacctcgtgg
gacaacccgtcggtgatgagcgcggagctgaaggcggcgcagagcggcttcgtcaactgg
atcaagaatcgcgtactgagtcgcggaccatcgcaggtgaacgtcaacctgcaactgccg
caggcaggcgaccagcccatggggccgatcgggcgcgagttcgccggcgtggcgaagctg
ctggccgcgcgcgacaaggacgcctcgctgctgggcggctacctgcaaaccctgtcgaag
ctgcgcgggcgcctcaaccagctcaagaaccagggcgatcctggtcccggcgcgcgccag
ttcatgcagcaaacgctggaaggcaccggctccgagctggccgacgcattgcgccacgtg
gacgagcagatgctcaacggtatgagcgacagccagaagcaggcgattcgtccgctgctg
gtacgcccgctgatgcaaacctttgcggtgctgatcgcgccggccgaggcggaaatcaac
aagacctggctggcacaggtcgtggagccgttccggcagacgctggccgacaagtatccg
ttcgcgccgaacggccgcaccgaagcggccggcgccgacatcgcccgcgtcttcggaccg
gacggcctggtcgccaggttcgccaccaccgccatgggcccgctggtggtgcggcgcggc
gacgtgctggcgccgcgcacctgggccgacatgggcattgcgctggcgccgcagacggcc
acgcgctttgccggctggatcgcgcccctgaacggcgcgggcggggccgatactccgccg
caaaccgtgttccagatccagcccatgccggcgcccggcgcgctcgaatacgtggtcgat
atcgacggccagcagctccgctaccgcaatacgccgccgcagtgggcgcacatggtccat
ccgggccccaccggcgccgagggcgcgcgcatcaccgccaccagcgttgatggccgcagt
gtcgatgtgttcaaccagcccggaccgcagggtctgaaaatgatgatcgacgcggcagcc
aagcagcgccgcgaaggcggcgtgttcgagctgcgctggaccaccggcacggtgaccgtg
gcgatgggcctgaaaatcatcagcagcccggagagcggcaacgatgatcccgaaccgccc
gccccgctccagcgtttcaagggcatgcagctgcccgagaccgtggtcggtgcgggcact
gttgccggtggttcgacggccgtagcagccattgcggccgccgggaccgcaccatga

DBGET integrated database retrieval system