Duganella zoogloeoides: SR858_18465
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Entry
SR858_18465 CDS
T09628
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzo03021
]
SR858_18465 (rpoS)
Transcription machinery [BR:
dzo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SR858_18465 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
KORA
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WQH03035
LinkDB
All DBs
Position
complement(4180593..4181597)
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AA seq
334 aa
AA seq
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MTNTPHDPLDDDVPEDFRDNDAVDDEDLAEDGAAAIGIGGSVLEPVDELKKVLAAELSTD
TTQHYLNQIGTRPLLTAPQEVHYATLAKAGDFSARQTMIEHNLRLVVSIAKHYINRGVVL
LDLIEEGNIGLMRAIDKFEPERGFRFSTYATWWIRQSIERAIMNQARTVRLPVHMVRELN
QILRGKYHLEAQQHDGKDATAEDIAALVGRPVEEVQDILALSEHATSLDAPLDNDPQSSL
MDLLPGDSDDSPDARAEHHEMTVLMRDWLTKLPDKQRIVIMRRFGLDNDDPATLETLAEE
MGVTRERVRQIQQEALVKLKRAMAARGVVRDSLL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacacgccccacgatccgctcgatgacgatgtcccggaagacttccgcgacaac
gatgcagtcgatgacgaagaccttgcggaagatggggcggcagcaatcggcatcggcggc
agcgtgctcgaaccggtcgatgaactgaaaaaagtgctggcggcggaattgtccaccgat
accacccagcactacctgaaccagatcggcacccggccgctgctcaccgcgccgcaggag
gtgcattacgccaccctggccaaggccggcgacttcagcgcccggcagaccatgatcgag
cacaatctgcgcctcgtggtctcaatcgccaagcattacatcaaccgcggcgtggtgctg
ctcgacctgatcgaagaaggcaacatcggcctgatgcgcgcgatcgacaagttcgaaccg
gagcgcggcttccgcttttccacgtacgccacctggtggatccgccagagcatcgagcgc
gccatcatgaaccaggcgcgcacggtgcgcctgcccgtgcacatggtgcgcgagctgaac
cagatcttgcgcggcaaataccacctcgaagcgcagcagcacgacggcaaggacgccacc
gccgaggacatcgccgcgctggtcggccgcccggtggaagaggtgcaggacatactcgcc
ctgtccgagcacgccacctcgctcgacgcgccgctcgacaacgatccgcaatcgtcgctg
atggacctgctgccgggcgacagcgacgacagtcccgacgcccgcgccgagcaccacgaa
atgacggtgctcatgcgcgactggctcaccaagctgcccgacaagcagcgcatcgtgatc
atgcgccgcttcggcctcgataacgacgatccggccacgctggaaaccctggccgaggaa
atgggcgtcacgcgcgagcgcgtgcgccagatccagcaggaagccctggtcaagctcaaa
cgggcgatggcggcgcgcggcgtggtccgcgattcgctgctgtag
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