Duganella zoogloeoides: SR858_20005
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Entry
SR858_20005 CDS
T09628
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dzo03032
]
SR858_20005
03036 Chromosome and associated proteins [BR:
dzo03036
]
SR858_20005
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_20005
DNA replication proteins [BR:
dzo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SR858_20005
Chromosome and associated proteins [BR:
dzo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SR858_20005
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SR858_20005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
CATASP
Par3_HAL_N_term
Motif
Other DBs
NCBI-ProteinID:
WQH03319
UniProt:
A0ABZ0XVB1
LinkDB
All DBs
Position
complement(4528347..4528652)
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELINRLAERYSQLVAKDAEYAVKTILDAMTNALATGQRIEIRGFGSFALNSRPPRI
GRNPKSGDKVMVPEKRVPHFKPGKQLRERVDAMVGQPIIED
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtccgaactcatcaaccgcctggctgagcgttattctcagctggtggccaaa
gatgcggagtacgcggtcaagaccattcttgatgcgatgaccaacgccctggcgaccggt
caacgcatcgagatccgtggttttggcagctttgccctcaacagccggccgccacgcatc
gggcgtaaccccaagtcgggtgacaaggtgatggtgcctgaaaaacgggtaccccacttc
aaacccggcaagcagttgcgcgagcgggtcgacgcgatggtcgggcagccgatcatcgag
gactga
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integrated database retrieval system
