Duganella zoogloeoides: SR858_20045
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Entry
SR858_20045 CDS
T09628
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dzo03032
]
SR858_20045 (gyrA)
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_20045 (gyrA)
Enzymes [BR:
dzo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SR858_20045 (gyrA)
DNA replication proteins [BR:
dzo03032
]
Prokaryotic type
DNA Topoisomerases
SR858_20045 (gyrA)
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SR858_20045 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WQH03326
LinkDB
All DBs
Position
complement(4536922..4539642)
Genome browser
AA seq
906 aa
AA seq
DB search
MDQFAKETIPISLEEEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFSMHESNYVWN
RAYVKCARVVGDTMGKYHPHGDASIYDTLVRMAQHFSLRYMLVDGQGNFGSVDGDGAAAM
RYTECRLAKISSELLADIDKDTVDFQPNYDGKEKEPTVLPTRIPNLLINGSSGIAVGMAT
NIPPHNLHEVIAGALHVLQNPQCSIDELIELIPAPDFPTGGIIYGVSGVRDGYRTGRGRV
VMRAKTHYEEYGKDGGRTAIIVDELPYQVNKKSLLERIAENVRDKKLEGISDIRDESDKS
GMRVVIELKRGEVPEVVLNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKEMLQCFLSHRR
EVVTRRTVFELRKARERGHVLEGLAVALANIDDFIALIKAAPTPPVAKAALMDRSWDSSI
VREMLARTGEGDTVGGIEAFRPEHLPKHYGIQADGMYRLSDDQAQEILQMRLQRLTGLEQ
DKIVNEYKDVMAEIADLLDILSKPSRVTTIITDEMTSVVTEFGDPAKDPRRSSIEHNASD
LNTEDLITPQDMVVTLSHTGYMKAQPISEYRSQKRGGRGKQAMATKEEDWIDQLFIANTH
DYILCFSNRGRMYWLKVWEVPQGSRNSRGKPIVNMFPLADNEKITVILPLSGENRTFPED
HYVFMSTSLGTVKKTPLKDFSNPRKAGIIAVDLDEGDFLIGAALTDGEHDVMLFSDSGKA
VRFDENDVRPMGRNARGVRGMNLDEGQRVIALLVAENEQQSVLTATENGYGKRTPITEYT
RHGRGTKGMIAIQTSERNGRVVAATLVEPTDEIMLITTGGVLIRTRVAEIREMGRATQGV
TLIAVEDGTKLSGLQRVVETDIDEVELEPGPDGKPVVAAAPAVADADGADATDAGDDKPA
DDVQPE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgcaaaagaaacaattcctatttccctcgaagaagagatgcgcaagagc
tacctcgattacgccatgagcgtgatcgtgggccgcgccttgccggacgtgcgcgacggc
ttgaagccggtgcaccgccgggtcttgttctcgatgcatgaatccaattacgtgtggaac
cgcgcttacgtcaagtgcgcgcgcgtggtcggcgacaccatgggtaagtaccacccgcac
ggcgacgcgtcgatttacgacacgctggtgcgcatggcgcagcacttctcgctgcgctac
atgctggtcgatggccagggtaacttcggttcggtcgatggcgacggcgcggccgcgatg
cgttacaccgagtgccggctggccaagatctccagcgaactgctggccgatatcgacaaa
gacacggtcgacttccagcccaactacgacggcaaggaaaaagagccgaccgttctgcct
acccgcatccccaacctgctcatcaacggctcgtccggtattgccgtgggtatggccacc
aacatcccgccgcacaatctgcacgaagtgattgccggcgcgctgcacgtgctgcaaaac
ccgcaatgctcgatcgacgaactgatcgaactgatcccggcgccggactttccgaccggc
ggtatcatttacggcgtctcgggcgtgcgcgacggttaccgcaccggccgtggccgcgtg
gtcatgcgcgccaagactcactacgaggaatacggcaaggacggcggccgcaccgcgatc
atcgtcgacgagctgccgtaccaggtcaacaagaagtcgctgctggagcgcatcgccgaa
aacgtgcgcgacaagaagctcgaaggcatttccgacatccgcgacgagtccgacaaatcg
ggcatgcgggtggtgatcgagctgaaacgcggcgaagtaccggaagtcgtcctgaacaac
ctgtacaagcagacccagttgcaggatacgttcggcatgaacatggtggcgctggtcgac
ggccagccgcgcctgctgaacctgaaggaaatgctgcagtgcttcctgtcgcaccgccgc
gaagtggtcacgcgccgcaccgtgttcgaactgcgcaaggcgcgcgaacgcggtcacgtg
ctcgagggtctggccgtggctctggccaacatcgacgacttcatcgccctgatcaaggca
gcgccaacgccgccggtggccaaggcggccctgatggaccgttcgtgggattcgtccatc
gtgcgcgaaatgttggcccgtaccggcgaaggcgataccgtgggcggcatcgaagcattc
cgtcccgagcacctgcccaagcactacggcatccaggccgacggcatgtaccgtttgtcc
gacgaccaggcgcaggaaatcctgcaaatgcgtttgcaacgcctgaccggtctggaacag
gacaagatcgtcaacgagtacaaggacgtgatggccgaaatcgccgacctgctggacatc
ctgtccaagccatcgcgcgtgaccaccatcatcaccgacgagatgaccagcgtggtcacc
gaattcggcgatcctgccaaggacccgcgtcgttcgagcatcgaacacaatgccagcgac
ctcaataccgaggacctgatcacgccgcaagacatggtggtcaccctgtcgcacaccggt
tacatgaaggcgcagccgatttccgagtaccgttcgcaaaaacgcggcggtcgcggcaag
caggccatggcgaccaaggaagaagactggatcgaccagctgttcatcgccaacacgcac
gattacatcctgtgcttctccaaccgtggccgcatgtactggctcaaggtctgggaagtg
ccgcaaggctcgcgcaactcgcgcggcaagcctatcgtgaacatgttcccgctggccgat
aacgagaagatcaccgtgatcctgccgctgtcgggcgaaaaccgcaccttccccgaagac
cattacgtgttcatgtccaccagcctgggcaccgtgaaaaagacgccgctgaaagacttc
agcaacccgcgcaaggccggcatcattgccgtggacctcgacgaaggcgacttcctgatc
ggcgctgcactgaccgacggcgaacacgatgtgatgctgttctcggattccggcaaggcc
gtgcgcttcgacgaaaacgacgtgcgtccgatgggccgcaatgcccgtggcgtgcgcggc
atgaacctcgatgaaggccagcgcgtgatcgcgctgctcgtcgccgagaacgagcagcag
tcggtgctgaccgccaccgagaacggctacggcaagcgtaccccgatcaccgagtacacg
cgccatggccgtgggaccaagggcatgatcgcgatccagacctccgagcgtaacggccgc
gtggtggccgccaccctggtggagccgaccgacgagatcatgctgatcaccaccggcggc
gtgctgattcgcacccgcgtggcggagatccgcgaaatgggccgcgccacgcaaggcgtg
accctgatcgcggtggaagacggcaccaagctgtccggcttgcagcgcgtggtggaaacc
gacatcgacgaagtggaactcgagcctggcccggacggcaagccagtggtagcggctgcc
cccgcagttgctgacgctgacggcgccgacgccaccgatgccggtgacgacaagcctgcc
gacgacgttcagccggagtaa
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