Duganella zoogloeoides: SR858_20160
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Entry
SR858_20160 CDS
T09628
Name
(GenBank) TetR family transcriptional regulator
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dzo03000
]
SR858_20160
Transcription factors [BR:
dzo03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SR858_20160
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_24
TetR_N
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
WQH03347
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All DBs
Position
4563204..4563851
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AA seq
215 aa
AA seq
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MQLPDVIDASRPKKRGRPLKGAGGGLRAELIEKSAELFRTKGYENTTVRDIAAAAGVQAG
SWFYHFKSKQDILAAIMEHGMEHALAEVERIGNQPLPPCQILSQLVEAHLHTLLAPDHHY
IAVLLYEWRSLDEPSRSRVVALKDRYEAVWDRAIGALHNSGDWVAPSQFDRLLIFGALNW
TVQWYKPDAGADVPELARQALRFILRTPPAPDAQT
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcaactccccgacgtcatcgacgcatcccgcccgaaaaaacgcggcaggccactcaag
ggagcaggcgggggattgcgcgccgagctgatcgagaaatcggccgagttattccgcacc
aagggttacgagaacaccaccgtgcgggatatcgcggcggcggctggcgtgcaggcgggt
agctggttttatcacttcaagtccaagcaggacatcctggccgccatcatggagcatggc
atggagcatgcgctggccgaggtcgaacgtatcggcaaccagccgctgccgccgtgccag
atcctgtcgcagctggtcgaagcgcacctgcacaccctgctcgcgcccgatcatcactat
attgccgtgctgctgtacgaatggcgttcgctcgacgagccgtcgcgttcgcgcgtggtc
gcgctcaaggaccgctacgaagccgtatgggatcgcgccatcggtgcgctgcacaattcc
ggcgactgggtggcgccgtcgcagttcgaccgcttgctgatcttcggcgcgctcaactgg
acagtgcagtggtacaagcccgatgcgggcgccgatgtgccggagctggcgcgccaggcg
ctgcgcttcatcctgcgcacgcctccagcacccgacgcacagacgtaa
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