Duganella zoogloeoides: SR858_20620
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Entry
SR858_20620 CDS
T09628
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dzo03000
]
SR858_20620
Transcription factors [BR:
dzo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SR858_20620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
HTH_30
HTH_5
HTH_20
NMT1_3
Motif
Other DBs
NCBI-ProteinID:
WQH03436
LinkDB
All DBs
Position
complement(4654950..4655900)
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AA seq
316 aa
AA seq
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MQYPSFRQLQSLVLVARHESVSRAADAMHVTQPAISLQLRTLEEIAGIALTRKVGRNIQL
TAAGEVMLDFSERMLRLWQQAEEELAALQGVTSGTLRIGAVTTAEHLLPPLLVPFTLKRP
DVHLKLQVGNRAEIISMLARHEIDLAIMGTPPRELRTNAARFARHPMAFVASPAHPLMKK
KRLTLADIKGANLMVRERGSGTRTAVERLLRDAGHPLEFGSEVSSNEAIKRMVSAGLGLG
FLSVHACGLEFEAGLLAILPMAGNPVEADWQIMHLTDQPIPKVAASFQDFVIEHGQDLVA
RELESVYKLLGRRKKV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatccgagtttccgccagttgcaatcgctggtcctggtggcgcggcacgagagc
gtgtcgcgggcggcggatgcgatgcacgtcacgcagccggcgatttcgctgcaactgcgc
acgctggaagaaattgccggcatcgccctcacgcgcaaggtgggccgcaatatccagctc
accgctgcgggcgaggtgatgctcgatttttccgaacgcatgctgcggctgtggcagcag
gcggaggaagaactggcggcgctgcaaggcgtcaccagcggcacgctgcgcatcggcgcg
gtcaccaccgccgagcatttgctgccgccgctgttggtgccgtttacgttgaagcgcccc
gacgtccacttgaaactccaggtgggcaaccgcgcggagatcatcagcatgctggcgcgc
cacgagatcgacctggccatcatgggcacgccgccgcgcgagctgcgcaccaacgcggcc
cgcttcgcgcgccacccgatggctttcgtggccagcccggcccaccctttgatgaagaag
aagcgcctcacgctggccgacatcaagggcgccaacctgatggtgcgcgaacgcggctcg
ggcacccgcaccgccgtcgaacggctgctgcgcgacgccggtcatccgctcgaattcggc
tccgaggtgtcgagcaacgaggcgatcaagcgcatggtgtcggccggcctggggctgggc
tttttgtcggtgcacgcgtgcgggctggaattcgaggcgggcctgctggcgattttgccg
atggccggcaacccggtcgaagcggactggcaaatcatgcacctgaccgaccagccgatc
cccaaggtggcggcatcgtttcaggacttcgtgatcgagcacgggcaagacctggtggcg
cgcgagctggagagcgtctataaactgctggggcggcgcaaaaaggtgtga
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