Duganella zoogloeoides: SR858_20690
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Entry
SR858_20690 CDS
T09628
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
dzo
Duganella zoogloeoides
Pathway
dzo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SR858_20690 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dzo02000
]
SR858_20690 (xylF)
Transporters [BR:
dzo02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
SR858_20690 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
WQH03449
LinkDB
All DBs
Position
complement(4674442..4675446)
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AA seq
334 aa
AA seq
DB search
MKKLLTSAAVAVMLVCAGGNAMADAKNPKIGFSIDDLRLERWARDRDYFVAAAEKQGAKV
FVQSADASEQRQIAQIENLISRGVDVLVIVPYNATVLNNAIREAKKAKIKVVSYDRLILN
ADVDAYISFDNKKVGELQAKGVLAVKPKGNYYLLGGAPTDNNAKMLREGQLAVLQPLIDK
GDIKVIGKQWVKDWSPSEAMSIIENALTANGNKLDAVVASNDATAGGAVQALASQKLDGK
VAVSGQDADLAGVRRVIAGTQTMTVYKPLRLIATEAANLSIQLVRGEKPAFNAKINNGFK
QVDTRLLEPTLLTKANVDTVVTDGFYTKAQLAAK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattactcacttccgccgccgtcgcggtcatgctggtgtgcgcaggcggcaac
gccatggcggacgccaagaatccgaaaatcggcttctcgatcgacgacctgcgcctcgag
cgctgggcgcgcgaccgcgattattttgtcgccgcggccgagaagcagggcgccaaggta
ttcgtgcaatcggccgacgccagcgagcagcgccagatcgcccagatcgaaaacctgatc
tcgcgcggcgtcgacgtgctggtcatcgtgccgtacaacgccacggtgctcaacaacgcc
atccgcgaggcgaaaaaggccaagatcaaggtggtgtcgtacgaccgcctgatcctcaat
gccgatgtcgatgcctacatctcgttcgataacaagaaggtcggcgagctgcaggcgaag
ggcgtgctggccgtcaaaccgaagggcaattactacctgctgggcggcgcccctaccgac
aacaacgccaagatgctgcgcgaaggccagctggcagtgctgcaaccgctgatcgacaag
ggcgacatcaaggtcatcggcaagcagtgggtgaaagactggagcccgtccgaggccatg
tcgatcatcgaaaacgcgctgaccgccaacggcaacaagctcgatgcggtggtcgcgtcc
aacgacgccaccgccggcggtgcagtgcaggcgctggcctcgcaaaaactcgacggcaag
gtggccgtgtcgggccaggatgccgatctggccggcgtgcgccgcgtgatcgccggcacc
cagaccatgacggtgtacaagccattgaggctgatcgccaccgaggcggccaatctgtcg
atccagctggtacgcggcgagaagccggccttcaacgccaagatcaacaacggcttcaaa
caggtcgatacgcgcctgctggaaccgaccttgctgaccaaggccaacgtcgataccgtc
gtcaccgacggcttctacaccaaggcccagctggccgccaagtaa
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