Duganella zoogloeoides: SR858_20910
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Entry
SR858_20910 CDS
T09628
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dzo03009
]
SR858_20910
Enzymes [BR:
dzo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
SR858_20910
Ribosome biogenesis [BR:
dzo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SR858_20910
BRITE hierarchy
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WQH03488
LinkDB
All DBs
Position
complement(4726294..4728678)
Genome browser
AA seq
794 aa
AA seq
DB search
MNNPKSPETVNDAAEVAVAKPKRRTKAQIAAESSGVADAAPVAAVASDAAPAAKPKRKPK
ADASAAAAAPAVVEAVAAEAATVAVKKPRAKPAAKVVAEATAAPAAAAAPAAAAPAVATS
APAAAAAAAPAVAAPVADRVAAADAPAKPARAPRARKAVADAAASAAAQPAEAPAAEAAA
GDAAPADGVPRIDRGQRPRGPRQMREQRAVREALMPKVEAVEAAPAAAVEGAAGAEGAEG
AVEARQPNERGQRNGRQGGQGGAQAGQPRNGKNGKGKNAKGRGQPGDKPSDADAVFSFVT
SDAFDSEEGGRGRQPQKAARRDLTADDDAPKLHKVLAEAGLGSRRDMEDLIVAGRVSVNG
EPAHIGQRILPTDAVRINGKLIQRRVSKKPPRVLVYHKPAGEIVSTDDPEGRPSVFSRLP
TMKAGKWLAVGRLDFNTEGLLLFTTSGDLANRLMHPRYGIDREYAVRTLGVLEEGMRQKL
LAGVELEDGLAQFSKIADGGGEGINKWYRVIIGEGRNREVRRMFEAIGLTVSRLIRTRYG
AMTLPSSLKRGRWEELEENQVRDMLAVYGVEKKGGADGAAAAAPARAGKGPQAKPVQNKG
PEKRPQRSRAEYDDRDDDDEDDLDEPNFNRADVSNDNALPFAKPPRGQGRGQVGQGGFGG
GQGRPNGGGQGRGAGGGQGGGQGGRAGGGNGRAGGAQGSSRPGGRPQGIGAYAGGRPLGD
AAPARASGPRPQGQGGQGGQGRGQQAKPANKGPRQPDPLQTTFGFGNSSGAPRRGQQQPR
GGASDHGMPRRRKG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcctaaatccccagagacagtcaacgacgccgccgaagtagcggtcgccaag
cccaagcgccgcaccaaggcccagatcgcagcggaaagcagcggcgttgccgatgcggcc
ccggttgctgccgtggcgagcgatgccgcgccggccgccaagccgaaacgcaagcccaag
gccgatgcgtccgcagcagcggcagcgccggcagtggtcgaggcggttgccgccgaggcc
gcgacggtcgccgtgaaaaagccgcgcgccaagccggctgccaaggttgtcgctgaggca
actgctgctcctgccgccgcagccgcgcctgccgccgctgcgcctgctgttgctacttct
gctcctgccgctgctgccgccgctgcgccagctgttgccgcgccagtcgccgaccgcgtc
gctgctgctgacgcgccagccaagccggcccgcgcgccgcgcgcccgcaaagccgtggcc
gatgccgcagcgtccgccgccgcacagccggccgaggcgccagctgccgaagctgccgcc
ggcgacgccgcgcctgccgatggcgtaccgcgcatcgaccgtggccagcgtccgcgtggc
ccgcgccagatgcgcgaacagcgcgccgtgcgcgaagcgctgatgccgaaggtggaagcg
gtggaagctgctcctgctgcggcagtggaaggcgctgcgggtgccgaaggtgccgagggc
gctgtggaagcgcgccagccgaacgagcgcggccaacgcaacggccgccagggtggccag
ggcggcgcccaagccggccagccacgcaatggcaaaaacggcaagggcaagaacgccaaa
ggccgcggccagcccggcgacaagccgagcgacgccgatgccgtgttctcgttcgtcacg
tccgacgccttcgacagcgaagaaggtggccgtggccgccagccgcaaaaagcagcgcgc
cgcgatctgaccgccgacgacgatgcaccgaagctgcacaaggtgctggctgaggccggt
ctcggctcgcgccgcgacatggaagacctgatcgttgccggccgcgtgtcggtcaacggc
gagccggcccacatcggccagcgcatcctgccgaccgatgcggtccgcatcaatggcaag
ctgatccagcgccgcgtgagcaagaagccgccgcgcgtgctggtgtaccacaagcctgcc
ggcgaaatcgtctcgaccgatgatccggaaggccgtccatcggtgttttcgcgcctgccg
accatgaaggccggcaagtggctggccgtcggccgcctcgacttcaataccgaaggcctg
ctgctgtttaccacgtccggtgacctggccaaccgcctgatgcacccgcgctacggtatc
gaccgcgaatacgcggtgcgtaccctgggcgtgctggaagaaggcatgcgtcaaaagctg
ctggccggcgtcgagctcgaagacggcctggcgcagttctcgaaaatcgccgacggtggc
ggcgagggcatcaacaagtggtaccgcgtgatcatcggcgaaggccgtaaccgcgaagtg
cgccgcatgttcgaagcgatcggtctgaccgtctcgcgcctgatccgtacccgctacggc
gccatgaccctgccgagcagcctgaagcgcggccgctgggaagagctggaagaaaaccag
gtgcgcgacatgctggccgtgtacggcgtcgagaaaaaaggcggcgccgacggtgcggct
gctgccgcacctgcgcgtgccggcaagggcccgcaagccaagccggttcagaacaagggc
ccggaaaagcgtccgcaacgtagccgtgcagaatacgacgaccgtgacgacgacgacgag
gacgacctcgacgaaccgaacttcaaccgcgccgatgtcagcaacgacaacgcgctgcca
ttcgccaagccgccacgcggccagggccgtggtcaggttggtcagggcggcttcggtggc
ggccagggccgtccgaacggcggtggccaggggcgcggcgcgggcggcggccagggcggt
ggccagggtggccgcgccggtggcggcaatggccgtgccggtggcgcccagggatcgagc
cgtcccggtggtcgtccgcagggcattggtgcgtacgctggcggccgtccgctcggcgat
gcggcgccggcgcgtgccagcggtccgcgtccgcaagggcagggcggccagggtggccag
ggacgtggccagcaggccaagccggccaacaaaggcccgcgccagcccgatccgttgcaa
accacgtttggtttcggcaacagcagtggcgcaccgcgtcgcggtcagcagcagccgcgt
ggcggcgccagcgaccacggcatgccgcgtcgtcggaagggttaa
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