Duganella zoogloeoides: SR858_21820
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Entry
SR858_21820 CDS
T09628
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo00470
D-Amino acid metabolism
dzo00550
Peptidoglycan biosynthesis
dzo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SR858_21820 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SR858_21820 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dzo01011
]
SR858_21820 (murD)
Enzymes [BR:
dzo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SR858_21820 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dzo01011
]
Precursor biosynthesis
Amino acid ligase
SR858_21820 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Pyr_redox_3
F420_oxidored
AdoHcyase_NAD
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
WQH03660
UniProt:
A0ABZ0XV84
LinkDB
All DBs
Position
complement(4947951..4949459)
Genome browser
AA seq
502 aa
AA seq
DB search
MSYDGKNALVLGLGESGLAMALWLARSGARVRVADTRESPERLPALQAAVPGVEFVAGAF
DAALLAGVDFVAVSPGLAPGRELAVIAPAAGAAGIPVWGEIELFARALESLKGERGYAPK
IIAITGTNGKTTVTTLVGQLCERAGKTVRVAGNISPAALDVLREVLDNDSLPDVWVLELS
SFQLETTFTLEAHAATVLNVTQDHLDWHGDMPSYAAAKHRIFAHDTVRVLNRDDATVMRM
ASNNGVNVSFGTDAPKHLGDFGLNNERNVLWLATAVPAEEEGEPKKRKKNDPPPPPVETT
VKNLMPSDALQIRGVHNAANALAALALCRAIDLPLAPLLHGLRDYRGQPHRVELVGAIND
VEYYDDSKGTNVGATVAALNGLGKAFTGADQRLVVILGGDGKGQDFGPLAEPAARYVRAA
LLIGRDAPLLRAALADTGIALEDCGTDLPKAVMRARDLAQTGDAVLLSPACASMDMFKNY
AHRAQVFIDTVREIALDNGQEL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgacggcaaaaacgcactggttttaggcctcggcgaatccggcctggcgatg
gcgctgtggctcgcccgcagcggcgcgcgcgtacgcgtggccgatacccgcgagtcgccc
gagcgcctgcctgccttgcaagctgcggtgccaggcgtggagttcgtcgccggtgcgttc
gacgcggcgctgctcgctggcgtcgatttcgtcgctgtcagtccgggcctggcgccgggc
cgcgaactggccgtgatcgctccggcagccggtgccgccggtattccggtctggggcgag
atcgagttgttcgcccgggcgctggagtcgttgaagggtgaacgcggttatgcaccgaag
atcatcgcgatcactggcaccaatggcaaaacgaccgtgaccacgctggtgggccagttg
tgcgaacgcgcgggcaagaccgtgcgcgtggcgggcaatatcagcccggcggcgctcgac
gtgctgcgcgaggtactcgataacgacagcttgcctgacgtgtgggtactggaactttcc
agcttccagctcgaaaccaccttcaccctcgaagcgcacgccgccaccgtattgaacgtc
acccaggaccacctggactggcacggcgacatgccgtcgtatgccgccgccaagcaccgc
atcttcgcccacgacaccgtgcgcgtactgaaccgcgacgacgcgaccgtgatgcgcatg
gccagcaataacggcgtcaatgtcagtttcggtaccgatgccccgaaacacctgggcgac
tttggcctcaacaacgagcgcaacgtgctgtggctcgccaccgccgtgccggccgaggaa
gagggcgagccgaagaagcgcaagaagaacgatccgccgccgccaccggtcgagaccacg
gtgaaaaacctgatgccgtccgacgcgctgcaaattcgtggcgtgcacaacgccgccaac
gcgctggccgcgctggcgctgtgccgcgccatcgacctgccgctcgcgcccctgctgcac
ggcctgcgcgactaccgcggccagccgcaccgggtggaactggtgggcgcgatcaatgac
gtcgaatactacgacgacagcaagggtaccaacgtgggcgccaccgtggccgcattgaac
ggcctcggtaaagccttcacgggcgccgaccagcgcctggtggtgatcctgggcggcgac
ggcaagggccaggacttcggtccactggccgaaccggccgctcgctacgtgcgcgccgcg
ctgctgattggccgggatgcgccgctgctgcgcgctgcgctggcggataccggcatcgcg
ctggaagactgcggcaccgatctgcccaaggcggtcatgcgtgcgcgcgacctggcgcag
accggcgacgccgtgctgctgtcgcccgcgtgtgccagcatggacatgttcaagaattac
gcgcatcgcgcccaggtgttcatcgacaccgtgcgcgagatcgccctcgacaacggacag
gagctctga
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