Duganella zoogloeoides: SR858_21900
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Entry
SR858_21900 CDS
T09628
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzo03021
]
SR858_21900 (rpoH)
Transcription machinery [BR:
dzo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SR858_21900 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
WQH03675
LinkDB
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Position
4966956..4967855
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AA seq
299 aa
AA seq
DB search
MTMMSATTSLAAANNSALGLGFTGNLGNLDAYISAVNRLPMLTHADEVSLGKRLKESNDL
AAAQQLVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQNVRLVSYAMH
WIKAEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKTGLDAMSPAQVDSLAKMLDVKREE
VIEMETRLSGRDIALESPTDDEDDKFAPIAYLSSEQSEPTRVLEAEQVTRLQSEGLEQAL
GKLDARSRRIVEARWLANDDGSGATLHTLAEEFGVSAERIRQIESAALKKMKGSLAAYV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgtccgcaacgacctcgttggccgctgccaacaacagtgctttgggactc
gggttcactggcaacctggggaacctggacgcctatatttcggctgtcaaccgcctgccg
atgttgacgcacgccgatgaggtatcgctgggtaaacgcctcaaggaaagcaacgatctg
gccgctgcgcagcaactggtgctgtcgcacctgcgcctggtggtatcgatcgcccgtggc
tacctcggttacggtttgccgcatgccgatctgatccaggaaggtaatatcggcctgatg
aaggcggtcaagcgtttcgaccccgaccagaacgtgcgcctggtgtcgtacgccatgcac
tggatcaaggccgagatgcatgagtacatcctgaaaaactggcgcctggtcaaggtggcc
accaccaaggcccagcgcaagctgttcttcaacctgcgcagccacaagaccggcctcgat
gcaatgagcccggcgcaagtggatagcctggcgaagatgctcgacgtcaagcgtgaagaa
gtaatcgagatggaaacccgtctcagcggtcgcgacatcgcgctggagtcgccaaccgac
gacgaagacgacaagttcgcgccgatcgcctatctgtcgtccgagcaatcggaaccgacc
cgggtgctggaagcggagcaagtcacgcgcctgcaatcggaaggcctggagcaggcgctg
ggcaagctcgacgcccgctcgcgtcgcatcgtcgaagcgcgctggctggccaacgacgac
ggctcgggcgccacgctgcacacgctggcggaagagttcggcgtatcggccgagcgcatc
cgccagatcgagtcggcagcgttgaagaaaatgaagggttcgctggcggcttacgtttaa
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