Duganella zoogloeoides: SR858_22295
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Entry
SR858_22295 CDS
T09628
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_22295
Enzymes [BR:
dzo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SR858_22295
DNA repair and recombination proteins [BR:
dzo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SR858_22295
Prokaryotic type
SR858_22295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WQH03752
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All DBs
Position
5042130..5043578
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AA seq
482 aa
AA seq
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MKHDSTLVWLRRDLRVFDHVALHQALQDSHKVYCAFIYDSTILDALPRQDRRVDFIHASV
AEVDAELRQMGGCLLARHGDPLTAIPALAAELKVDAVYCNHDYEPQAIARDAAVAKALQA
DGRAFASFKDQVVFEKSEVLSQTGGVFSVFTPYKNAWLKKLDADPSVIAPYHIEPHAARL
APPPSPAPKLPTLKQLGFEQSNLAELKIPTGMSGAAQLFEDFLPRIAHYKTARDFPAVKG
PSYLSLHFRFGTLSVRHLVRTVVDLMARGGGGEGAPVWLAELIWREFYAMILFHNPHVVG
GSFKPAYDAIEWETGEEADELFAAWCEARTGYPLVDAAMLQLNQTGYMHNRLRMVTACFL
IKDLGIDWRRGEAYFALHLNDFDLASNNGGWQWASSSGCDAQPYFRIFNPITQSEKFDGA
GKFIRRYLPQLKHLTDKEIHAPWVHSRMEPLKYPGPIVMHDEARKRTLERYEVVKKVKPP
ED
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacacgattcaaccctggtatggctgcgccgcgatctgcgcgttttcgatcatgtt
gccctgcatcaggcactgcaagacagccacaaagtctactgcgcattcatctatgacagc
accatcctggacgctttgccgcgccaggaccggcgcgtggacttcatacacgccagcgtg
gccgaggtcgatgccgaactgcgccagatgggcggttgcctgctggcacgccacggcgat
ccgctgacggcaatcccggcgctggccgccgaattgaaagtcgatgcagtgtattgcaac
cacgactacgagccgcaggccatcgcccgtgatgccgctgttgccaaagcgctgcaagcc
gacggccgcgcgttcgccagcttcaaggaccaggtggtgttcgagaaaagcgaagtgctg
tcgcaaacgggcggcgtgttctccgtcttcaccccgtacaagaatgcctggctcaagaag
ctcgacgccgatccgagcgtgatcgcgccttaccatatcgaaccgcacgccgcgcgcctg
gcgccgcctccctcgcccgcacccaagttgcccaccttgaagcagctcggcttcgaacag
agcaacctggccgaactgaaaattcccaccggcatgtccggcgccgcccaactgttcgag
gatttcctgccgcgcatcgcgcactacaagaccgcgcgcgacttccctgccgtgaaaggc
ccgtcgtacctgtcgctgcatttccgcttcggcacgctgtcggtgcgccacctggtgcgc
acggtggtggacctgatggcgcgcggcggcggtggcgaaggcgcaccggtgtggctggcg
gaactgatctggcgcgagttctacgccatgatcctgttccacaacccgcacgtggtgggc
ggctcgttcaagcccgcctacgacgccatcgaatgggaaaccggcgaggaagccgacgaa
ctgttcgcagcctggtgcgaagcgcgcaccggctacccgctggtggacgcggccatgctg
caactgaaccagaccggctatatgcacaaccgcctgcgcatggtcaccgcctgcttcctg
atcaaggacctcggcatcgactggcgccggggcgaggcctatttcgcgctgcacctgaac
gatttcgacctggcctcgaacaacggcggctggcagtgggcgtcatcgtcgggctgcgat
gcgcaaccgtacttccgcatcttcaacccgatcacgcagtcggaaaaattcgacggcgcc
ggcaaattcatccgccgctacctgccgcagctgaagcacctgaccgacaaggaaatccac
gcgccatgggtgcactcccgcatggaaccgctcaagtacccgggcccgatcgtcatgcac
gacgaggcgcgcaagcgcacgcttgagcgctatgaagtcgtcaagaaggtcaaaccgccg
gaggattga
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