Duganella zoogloeoides: SR858_22500
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Entry
SR858_22500 CDS
T09628
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dzo
Duganella zoogloeoides
Pathway
dzo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SR858_22500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dzo02022
]
SR858_22500
02035 Bacterial motility proteins [BR:
dzo02035
]
SR858_22500
Two-component system [BR:
dzo02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
SR858_22500
Bacterial motility proteins [BR:
dzo02035
]
Pilus system
Twitching motility proteins
SR858_22500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
HTH_28
AAA_22
HTH_30
HTH_50
Motif
Other DBs
NCBI-ProteinID:
WQH03792
UniProt:
A0ABZ0XVL7
LinkDB
All DBs
Position
complement(5100461..5101888)
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AA seq
475 aa
AA seq
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MSVRSPRVLVVDDEADLRELLELTLVKMGLDVDSAATVAEARALLARHPYQLVLTDMRLP
DGLGLELVRDVATTYKNTPIAVVTAFGSADNAVVALKAGAFDYIAKPVALDQLRLLVRSA
LRVHEAAPGMPGNGPADAAADAVDGRLKGGSAVMAALRAQIGRLARSMAPIAIHGESGSG
KELAAREIHARSPRAGQPFIAVNCGAIPEALMEAEFFGYRKGAFTGAADDRDGFFQAANG
GTLLLDEVADLPLAMQVKLLRAIQERRVRKIGATSEEPVDVRLISATHKNLARCVEQGAF
RQDLFYRLNVIELAVPPLRERQGDLPALADAILERLGGGGHKAALGPGVLEALAGYRFPG
NVRELENILERALAFANDGVIEVADLALKAGQGSQGGDGVAAAASSAASSAISSPAPADL
PASLPDYLIAIERDIILRALVQTQFNRTQAAQLLGISFRQLRYQMQKLNIQEPEA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgaggtccccccgcgtgctcgtcgtcgatgatgaagccgacctgcgcgaactg
ctggagctgaccctggtaaaaatggggctcgatgtcgacagcgccgctaccgtggccgag
gcccgcgcgctgctggcccgccacccctatcaactggtactgaccgacatgcgcctgccc
gacggcctggggctggaactggtgcgcgacgtggccaccacatacaagaacacgccgatc
gcggtggtcaccgctttcggcagtgccgacaacgcggtggtcgcgctcaaggccggcgcg
ttcgactacatcgccaagccggtcgccctcgatcagctgcgcctgctggtgcgttcggcg
ctgcgggtgcacgaggccgcgcccggtatgcctggcaatggcccggccgatgccgctgcc
gatgccgtggacggccggctcaagggcggatcggccgtgatggcggcgctgcgcgcgcag
atcggccggctggcgcggtcgatggcgccgatcgccatccacggcgaatcgggcagcggc
aaggagctggcggcgcgcgaaatccacgcccgcagcccgcgcgccggccagcctttcatt
gcagtcaactgcggtgcgatcccggaggcgctgatggaagccgagtttttcggctaccgc
aagggggcgtttaccggcgcggccgacgaccgcgacggctttttccaggccgccaacggc
ggcaccctgctgctcgacgaggtggccgatctgccgctggcgatgcaggtcaagctgctg
cgcgcgatccaggagcggcgcgtgcgcaagatcggcgctacgtcggaggagccggtcgat
gtgcgcctgatcagcgccacccacaagaacctggcgcggtgcgtggagcagggtgccttt
cgccaggacctgttctatcgcctgaacgtgatcgaactggcggtgccgccgctgcgcgaa
cgccagggcgatctgccggcgctggccgacgccatcctcgaacgcctcggcggcggcggc
cacaaggcggcgctggggccgggcgtgctcgaagcgctggccggctaccgctttcccggc
aatgtgcgcgaactggaaaacatcctcgagcgtgcgctggcgtttgccaacgacggcgtg
atcgaggtggccgacctggcgctcaaggccgggcaggggagccagggtggcgatggcgtg
gcggcggccgcgtcgtctgccgcgtcgtctgccatatcgtcgcccgcgccggccgacttg
ccggccagcctgcccgactacctgatcgccatcgagcgcgatatcatcttgcgggcactg
gtgcagacgcagttcaaccgcacccaggccgcgcaactgctgggcatcagcttccgccag
ttgcgctatcaaatgcagaaactcaatatccaggaacctgaagcatga
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