Duganella zoogloeoides: SR858_23530
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Entry
SR858_23530 CDS
T09628
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
dzo
Duganella zoogloeoides
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dzo03016
]
SR858_23530 (mnmC)
Enzymes [BR:
dzo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
SR858_23530 (mnmC)
Transfer RNA biogenesis [BR:
dzo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SR858_23530 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
NAD_binding_9
FAD_binding_3
Pyr_redox_2
Methyltransf_30
Shikimate_DH
NAD_binding_7
AlaDh_PNT_C
Pyr_redox
GIDA
3HCDH_N
TrkA_N
HI0933_like
MurD-like_N
2-Hacid_dh_C
Pyr_redox_3
Pectate_lyase
Motif
Other DBs
NCBI-ProteinID:
WQH03989
LinkDB
All DBs
Position
complement(5359148..5360932)
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AA seq
594 aa
AA seq
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MTVSHVVLDTEFGDGARFAQARARHDRQLHYLALTARVADAATIADPQLRALWPLDVPGF
HRIILDDGRVTLDLLAGEMTAVLPQVLARVDTFHIGALAPGQARTLARLASPGATLDARA
PDDLLVWALAAAGFACCRVDGGDDIVAEYRGRRVSSVARAAPTAAPAAPPADRAAPIAAT
ATPPVAGAGLSAALAAPPLRDKRAVVIGAGLAGASACRRLCASGWEVTLIERHAQPAQEA
SGNLAGIFMPLLSKDDNIPTRLARAAYLFALREWRRLGGVGTAFIGADCGVLQLARDAGH
AAVQRAVLDHWNYPPAFARWADATEAGALLGGATPHGGWLFAQGGWARPSSLCAAMLDAC
GDRLQRVFCSEAITLRRTGDGEWLVEGAGATLLAQAPTVILANGAGAVQIAQAAQLPLQS
LRGQVTHLAVGTSAPQLPLVVCREAYVTPAADGIVCAGATYDNDDDRVLRASSQRENLAR
LAEIVPGAHVAALIDTAPLAGRVGFRSAAPDRLPLAGALPDVESAGRLEHLRDVPRHPGL
YGLLGYASRGLIWAPLMAELLVSQLEGAPAPVEAALVEALDPGRFLLKQRRRSQ
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgtcgcatgtcgttctcgacaccgaatttggcgacggtgcgcgctttgcgcag
gcgcgcgcgcggcatgaccggcagctccattaccttgcgctgaccgcgcgcgtggccgat
gcggcgaccatcgccgatccgcagctgcgcgccctgtggccgctcgacgtgccgggtttt
caccgcatcatcctcgacgacggccgcgtcacgctcgatctgctggcgggcgaaatgact
gccgtgctgccgcaggtgctggcccgtgtcgatacctttcatatcggcgcgctggcgccc
gggcaggcgcgcacgctggcgcggctggcatctcccggcgccacgcttgacgcgcgcgcg
cccgatgacttgctggtgtgggccctggctgctgccggtttcgcctgctgccgggtagat
ggcggcgacgatatcgttgccgagtaccggggccgccgcgtgtcatctgtcgctcgtgca
gcaccgactgccgctcccgccgcaccgcctgctgatcgtgcagcaccgatcgccgctacc
gccacacctcctgtcgctggcgcaggattatccgctgccctggccgcgccaccgttgcgc
gataaacgcgcggtggtcatcggcgccggcctggcgggggccagcgcctgtcgccgcctg
tgcgccagcggttgggaggtgacgttgatcgagcgccacgcgcagccggcgcaggaggcg
tccggcaacctggcgggcatcttcatgccgctgctgtcgaaagacgacaacattcccacc
cgcctggcgcgtgccgcctacctgtttgcgctgcgcgagtggcgccggctgggtggcgtg
ggcacggccttcatcggcgccgattgcggcgtgctgcaactggcccgcgatgcaggccac
gccgccgtccagcgcgcggtgctcgaccattggaactatccgccggcgttcgcgcgctgg
gccgacgcaacggaagcgggcgcgctgctgggcggcgccacgccgcacggtggctggctg
ttcgcgcaaggcggctgggcgcgcccgtcatcgttgtgcgcggccatgctggacgcctgc
ggtgaccgcctgcagcgcgtgttttgcagcgaggcgatcactttgcgccgcaccggtgac
ggcgaatggctggtggagggagccggcgctaccttgctggcgcaagcgcccacggtaatc
ctggccaacggcgctggcgccgtgcagattgcccaggcggcccagttgccgttgcagtcg
ctgcgcggccaggtgacccacctggctgtggggaccagtgctccgcaactgccgctcgtg
gtatgccgcgaagcgtacgtgacgccggctgccgacggcatcgtttgcgctggcgccacc
tacgacaatgacgacgaccgtgtactgcgcgcaagcagccagcgggaaaacctggcgcgg
ctggcggagatcgtgcccggtgcgcacgtggcggccctgatcgataccgcgccgctggcc
ggccgggtgggctttcgcagcgccgcgccggaccgcctgccgctggccggcgcgctgccg
gatgtcgaatcggccggtcgcctggagcacttgcgtgacgtgccacgccacccgggtctg
tacggcctgctcggctatgcgtcgcgcggcctgatctgggcgccgctgatggccgaactg
ctggtgtcgcaactggaaggcgcgccggcaccggtcgaggcagcgctggtggaggcgctc
gaccccggccgcttcctgctcaagcagcggcgccgcagccagtag
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