Duganella zoogloeoides: SR858_24095
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Entry
SR858_24095 CDS
T09628
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo00300
Lysine biosynthesis
dzo00470
D-Amino acid metabolism
dzo01100
Metabolic pathways
dzo01110
Biosynthesis of secondary metabolites
dzo01120
Microbial metabolism in diverse environments
dzo01230
Biosynthesis of amino acids
Module
dzo_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SR858_24095 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SR858_24095 (lysA)
Enzymes [BR:
dzo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SR858_24095 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WQH04093
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All DBs
Position
5484358..5485635
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AA seq
425 aa
AA seq
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MSQFSYQDGVLHAEGVSLAAIAAEHGTPTYVYSKAALLGNFAAYADACQGRDALVCYAMK
ANSNLAILDLLARQGAGFDIVSGGELQRVLAAGGDPGKVIFSGVGKSVDEMRLALSHDIL
CFNVESIPELHRLNDVAGSMGKTARISLRVNPNVDPKTHPYIATGLKASKFGVAFDDALD
TYRAAAALPHIDVAGIDCHIGSQLLDDQPLLEALDRLIELIDRLGDEGITLHHLDMGGGI
GIDYREAGEAAPVPVGDYLGRVFARIDAWRAERYDGQPIKVIFEPGRSIVGDTGVLLTRV
EFIKHGEEKNFCIVDAAMNDMARPALYQAWMDMQPVVQGQAESKTYDIVGPICESGDWLA
RDRALAVAAGDLLVMHSAGAYGMTMASNYNTRGRAAEIIVDGTTAHIVRRRETPAELYAL
ESLIS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaattttcgtatcaagacggcgtgctgcacgccgaaggcgtgtcgctggccgcc
atcgccgccgagcatggcaccccgacctatgtctattccaaggccgcgctgctgggcaat
ttcgccgcgtacgccgacgcctgccagggccgcgacgcactggtgtgctacgccatgaag
gccaactccaacctggccatcctcgacctgctggcccgccagggcgccggcttcgacatc
gtctccggcggcgagctgcagcgcgtgctggccgcaggcggcgacccgggcaaggtgatt
ttctcgggcgtaggcaagagcgtcgatgaaatgcgcctggcgctgtcgcacgacatcctg
tgcttcaacgtcgaatcgatccccgagctgcaccgcttgaacgacgtggccgggtccatg
ggcaagaccgcgcgcatctcgctgcgcgtcaaccccaacgtcgatccgaaaacccacccg
tacatcgccaccggcctgaaagcgagcaaattcggcgtggcctttgacgatgcactggac
acctaccgcgccgctgccgcgctgccgcatatcgacgtggccggcatcgactgccacatc
ggctcgcaactgctggacgaccagccgctgctcgaagcattggaccgcctgattgaactg
atcgaccgcctcggcgacgaaggcatcaccttgcaccacctcgacatgggcggcggcatc
ggcatcgactaccgcgaagcaggcgaagccgcaccggtgccggtgggcgactacctgggc
cgcgtgttcgcccgcatcgacgcctggcgcgccgagcgttacgacggccaaccaatcaaa
gtgatttttgagccgggccgctcgatcgtgggcgacaccggcgtgctgctgacccgcgtg
gaattcatcaagcacggcgaagaaaagaacttctgcatcgtcgatgccgccatgaacgac
atggcccgcccggccctgtaccaggcctggatggacatgcagccggtggtgcaaggccag
gccgagagcaagacctacgacatcgtcggcccgatctgcgaatcgggcgactggctggcc
cgcgaccgcgcgctggcggtggcagccggcgacctgctggtgatgcactcggcaggcgcc
tacggcatgaccatggcctccaactacaatacccgtggccgcgccgccgaaatcatcgtt
gacggcactacggcccacatcgtccgtcgccgcgaaaccccggcggaactctacgccctg
gaatcgctgatcagctaa
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