Duganella zoogloeoides: SR858_24225
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Entry
SR858_24225 CDS
T09628
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dzo
Duganella zoogloeoides
Pathway
dzo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SR858_24225 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dzo03021
]
SR858_24225 (rpoA)
03400 DNA repair and recombination proteins [BR:
dzo03400
]
SR858_24225 (rpoA)
Enzymes [BR:
dzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SR858_24225 (rpoA)
Transcription machinery [BR:
dzo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SR858_24225 (rpoA)
DNA repair and recombination proteins [BR:
dzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SR858_24225 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF7219
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WQH04119
LinkDB
All DBs
Position
complement(5518634..5519611)
Genome browser
AA seq
325 aa
AA seq
DB search
MQNSLLKPRIIDVEALGAGHAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VVHEYSSLDGVQEDVVDLLLNLKGVVFKVHNRDSVTLTLKKEGEGAVLASDIDLPHDVEL
INPDHVIAHLTAGGKLDMQIKVEKGRGYVPGNVRRLSEDTNKTIGRIILDASFSPVRRVS
YFVESARVEQRTDLDKLIINIETNGVISPEEAIRQSARVLVDQLNVFAALEGTEAAAEAP
SRAPLVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtttgttgaagccacgtattatcgatgtagaggcgctcggcgccggccac
gcgaaagtcgtgatggagccgttcgaacgcggctatggccatacgttgggtaatgcgctg
cgtcgcgtactgctctcgtcgatggtgggctacgcgccgaccgaagtgacgatcgccggc
gtcgtgcacgaatactcgtcgctcgacggcgtacaggaagacgtcgtagacctgttgctg
aacctgaagggtgttgtcttcaaggtgcacaaccgtgactccgttaccctgaccctgaaa
aaagaaggcgaaggcgccgtcctggcttccgatatcgatctgccacacgatgtggaactg
atcaacccggaccacgtgattgcccacctgaccgccggcggcaagctggacatgcagatc
aaggtcgaaaaaggccgtggctatgttccaggtaacgtccgtcgcctgtcggaagacacc
aacaagaccatcggtcgcatcattctcgatgcatcgttctcgccagtgcgtcgcgtatcg
tacttcgtcgagtccgctcgcgtcgaacagcgtaccgacctggacaagctgatcatcaac
atcgaaaccaacggcgtcatctcgccggaagaagcgatccgtcaatcggcccgcgtgctg
gtcgatcaactgaacgtgttcgctgccctggaaggcaccgaagctgctgccgaagcgcca
tcgcgcgcaccgctggtcgatccgatcctgctgcgtccagtggacgatctggaactgacc
gtgcgttcggccaactgcctgaaagcagaaaacatctactacattggcgacctgatccag
cgttcggaaaacgagctgctgaagacgccaaacctgggccgcaagtcgctcaacgagatc
aaggaagttcttgcctcgcgcggcctgaccctgggcatgaagctggaaaactggccgcct
gcagggctggaaaaataa
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