Duganella zoogloeoides: SR858_27405
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Entry
SR858_27405 CDS
T09628
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
dzo
Duganella zoogloeoides
Pathway
dzo02010
ABC transporters
dzo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dzo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SR858_27405
03070 Bacterial secretion system
SR858_27405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dzo02000
]
SR858_27405
02044 Secretion system [BR:
dzo02044
]
SR858_27405
Transporters [BR:
dzo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SR858_27405
Secretion system [BR:
dzo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SR858_27405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_16
NB-ARC
nSTAND3
Zeta_toxin
SbcC_Walker_B
AAA_29
MobB
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WQH04721
LinkDB
All DBs
Position
6247876..6250026
Genome browser
AA seq
716 aa
AA seq
DB search
MQDKFPHTAVQCLTAIAQHHGLQINPERLIDEYALRAEEPGNGMLLRMASEIGLKAKADK
LTWSRLLAQGGVFPLMARLISGNMVIIVGVKPGEDGAPDQVAVLNPALANATVIMVARAE
FEQRWQGEVLFVKREHKFTDPHQPFGLRWFIPEILRQKAAFRDIFIAAIAMQILALASPI
FFQLVIDKVLTHQSVTTLQVLAVGITMALVFDALFGFLRQTLTLAASNKIDMRLTRRVFG
HLLSLPIDFFETTSAGVITRHMQQLEKIRSFLTGRLFFTALDLISLLVFIPILFSYSFKL
TLIVLLFAALIGGVVLAMVPTFQRRLNALYTAEGQRQGMLVETIHGMRTVKALAIEASQR
RTWDQRSAEAITMHFRVGQISIAGNAVTDFLGKLLPVTLIVVGAADVFDSTLSVGALIAF
QMLSGRVTQPLISLVGLVNEYQETALSVRMLGEVMNRAPEGRAGATGLRPQLDGEIRFDN
VIFRYPGAQNLALNKASFTIEQGTVVGIVGRSGSGKTTLTKLIQGLYPLQEGIVRFDGID
AREIELSHLRRQIGVVLQENFLFRGTVRENLSVTKPDAPFEELVAAAVAAGADEFIERLP
QGYDTILEENASNLSGGQKQRLSIARTLVARPRILILDEAASALDPESEAIFIKNLSKIA
VGRTVVMISHRLSTLVNADKIMVMQQGSLVDAGRHEELLTRSDTYQHLWNQQTSHL
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaatttccccacaccgcggtacagtgcctgacagcgatcgcacagcatcac
ggcctgcaaatcaaccccgaacgcctgatcgacgagtacgcgctgcgcgcggaagagccg
ggcaacggcatgctgctgcgcatggcgtccgagatcggcctgaaagccaaggccgacaag
ctgacctggtcgcgcctgctggcgcagggcggcgtgttcccgctgatggcgcgcctgatc
agcggcaacatggtcatcatcgtcggcgtcaagccgggcgaggacggcgcccccgaccag
gtggcggtactgaacccggcgctggccaacgccaccgtgatcatggtcgcgcgcgccgag
ttcgagcagcgctggcagggcgaggtgctgttcgtcaagcgcgagcacaagtttaccgac
ccgcaccagccgttcggcctgcgctggttcattcccgaaatcctgcgccagaaggcggcg
ttccgcgacattttcattgccgccatcgccatgcagatcctggcgctggcgtcgccgatc
ttcttccagctggtgatcgacaaggtgctcacgcaccagagcgtgacgaccttgcaggtg
ctggccgtgggcatcaccatggcgctggtgttcgacgcgctgttcggcttcctgcgccag
accctgacgctcgccgccagtaataaaatcgacatgcgcctgacgcgccgcgtgttcggc
cacctgctgtccctgcccatcgactttttcgagaccaccagcgccggcgtcatcacgcgc
cacatgcagcagctcgaaaagatccgcagcttccttaccggccggctgttcttcaccgcg
ctcgacctgatctcgctgctggtgttcattccgattttgttcagctactcgttcaagctg
accctgatcgtgctgctgttcgcggcgctgatcggcggcgtggtgctggccatggtgccc
accttccagcgccgcctcaacgcgctgtacacggccgagggccagcgccagggcatgctg
gtggaaaccatccacggcatgcgcacggtcaaggcgctggcgatcgaggcgtcacagcgc
cgcacctgggaccagcgctcggccgaggcgatcaccatgcacttccgggtggggcagatt
tcgatcgccggcaatgccgtcaccgatttcctcggcaagctgctgccggtcacgctgatc
gtggtgggcgcggccgacgtgttcgacagtaccctgtcggtcggtgcgctgatcgcgttc
cagatgctgtcgggccgcgtcacgcagccgctcatttcgctcgtcggcctggtcaacgaa
taccaggaaaccgcgctgtcggtgcgcatgctgggcgaggtgatgaaccgcgcgccggaa
ggccgcgccggcgccaccggcctgcgtccgcaactggatggcgaaatcaggttcgacaac
gtgatcttccgctatcccggtgcgcagaacctggccctcaacaaggccagctttaccatc
gagcagggcacggtggtgggtatcgtcggccgttccggttccggcaagaccaccttgacc
aagctgatccagggcctgtacccgctacaggaaggcatcgtccgcttcgacggcatcgac
gcgcgcgagatcgagctgtcgcacctgcggcgccagatcggcgtggtgttgcaggagaat
ttcctgttccgcggcacggtgcgcgagaacctgtcggtgaccaagcccgatgccccgttc
gaggaactggtggcggcagccgtcgcggccggcgccgacgaattcatcgagcggctgccc
cagggctacgacaccatcctggaagagaacgcctccaacctgtccggcggccagaagcag
cgactgtcgatcgcgcgcacgctggtggcgcgcccgcgcatccttatcctggacgaggcc
gcctccgcgctggacccggaatcggaagcgatcttcattaaaaatctgtcgaagatcgcg
gtgggccgcacggtggtgatgatttcgcaccgcctgtccacgctggtcaatgccgacaaa
atcatggtcatgcagcaaggctccctggtggatgccggccggcatgaagaactgcttacc
cgtagcgacacttaccagcatttatggaaccagcaaacaagccacctgtaa
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