Endosymbiont of Acanthamoeba sp. UWC8: I862_01805
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Entry
I862_01805 CDS
T03255
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
eaa
Endosymbiont of Acanthamoeba sp. UWC8
Pathway
eaa03410
Base excision repair
eaa03430
Mismatch repair
eaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I862_01805
03430 Mismatch repair
I862_01805
03440 Homologous recombination
I862_01805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eaa03400
]
I862_01805
DNA repair and recombination proteins [BR:
eaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
I862_01805
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I862_01805
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I862_01805
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AIF80924
UniProt:
A0A075MNP4
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Position
382142..383944
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AA seq
600 aa
AA seq
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MLAESNNAEGIKFGRSIRGLDWKFEEGCERTIRTLCQKLNINEVLARILYNRDVKTAEEA
ENFLDPKLKNLIHDPFALKDMDKASKRIIDAINNKEKICVFGDYDVDGATSSALLKRFFR
DLNIEIGVYIPNRLKEGYGPNKLAFDKLKEEGYSLVITVDCGIVSFEPLKHAKDIGLEVI
IVDHHLGIEQLPEAVAVINPNRFDEDFPYKYMAAVGVAFMVTVALRAKLREEDWFVKNNI
KEPDLLKLLDLVALGTVCDVMILKGVNRAFVTQGLKIIAKRGNIGIATLANLVKIDSAPK
AHHLGYAFGPRINAGGRVGEGILGTYLLSTECPKEAYNIAMQLEKYNEERRSIEIKALEE
AIEQIEKNRLYNNSIMLVKSKDWHIGILGILASKLKEKYSRPAGVMVIKEDTAKGSARSI
TGLDLGRALASAKTEGLLLEGGGHAMAGGFTVEISKMQPFCDYLINKLDIGAEPFIKAKE
LHIDHVLSVASVNHKLIEDINIAAPYGSGNPAPKFALHDVIITRALIVGGYHVMVIVTDK
KTDRGNKVQKCILFKGSETDLGQFLLNSIGKKVNIAGTIQASSFDKNKIDFIIEDAAIND
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgctagctgagtcaaacaatgccgagggcattaagtttggcaggtcgattagaggatta
gattggaagtttgaagaaggttgcgaaagaacaattagaactttatgccaaaaacttaat
attaatgaggttttggctagaatactttataatagagacgtaaaaactgctgaagaagca
gaaaactttttagaccctaaacttaaaaacttaatccacgatccatttgccctaaaagat
atggataaagcatctaaacgaataatcgatgctattaataataaagaaaaaatttgtgtt
ttcggcgattacgacgtggatggcgctacttccagcgcgttgttaaaaagattctttaga
gatttaaatattgaaatcggtgtctatatacccaaccgcctcaaggaaggatatggcccc
aataagctagcttttgataagctgaaagaggaaggttatagcttagtaatcacggtagat
tgcggaatagtttcctttgagccgcttaaacatgcaaaagatattggccttgaagtgatt
atagttgaccaccatttagggatagaacagctacctgaagctgtagccgtaattaatcct
aaccgatttgatgaagattttccttataaatatatggctgccgttggtgtagcatttatg
gtaacggttgctctaagagctaaactaagagaagaggattggtttgtaaaaaataatata
aaagagcctgatttactcaaacttttagatctggttgcactcggcaccgtatgtgatgtt
atgatattaaaaggagttaatagagcttttgttacccagggtcttaagattattgcaaag
cgcgggaatataggaattgctaccttagctaacctggttaaaattgattccgctccgaaa
gcacaccatttaggttatgctttcggcccccgtatcaatgcgggaggcagagtcggcgag
ggtattttaggaacttaccttctttctaccgaatgccctaaagaagcatataatattgca
atgcagctagaaaaatataatgaagaaagacgctctatagaaataaaagctttagaagaa
gctattgaacagatcgaaaaaaaccggctttataataattcaattatgctggtaaaaagc
aaggattggcatattggaattctcggcattcttgcaagtaaattaaaagaaaaatattcc
agacccgctggggtgatggtaataaaagaagataccgctaaaggctcagcacgttcgatc
acaggccttgatttaggcagggcgctggcaagcgctaaaactgaaggtttactccttgaa
ggcggtggtcatgctatggccggcggatttacagttgaaatttctaaaatgcagccattt
tgtgattatcttattaataaactggatataggtgcagaacctttcattaaagctaaggaa
ttacatattgatcatgttctttctgtcgcttccgtgaaccataaattaattgaagatatc
aacatagccgcaccttacggcagcggcaacccggcgcctaaattcgcccttcatgatgtc
atcataacccgtgctcttatagtcggtggctatcatgttatggttattgttaccgataaa
aaaaccgacaggggcaataaagtacagaaatgtattttatttaaaggctcagaaacggac
ttaggacaatttttgctaaatagtatcggcaaaaaagtcaacattgccggtactattcaa
gcgagtagttttgataaaaataaaatagactttattatagaagatgcagcaataaatgat
taa
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