Endosymbiont of Acanthamoeba sp. UWC8: I862_02410
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Entry
I862_02410 CDS
T03255
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
eaa
Endosymbiont of Acanthamoeba sp. UWC8
Pathway
eaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
I862_02410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eaa03400
]
I862_02410
DNA repair and recombination proteins [BR:
eaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I862_02410
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
I862_02410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
P-loop_SecA
AAA_5
Microtub_bd
DUF2963
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIF81045
LinkDB
All DBs
Position
complement(494955..496934)
Genome browser
AA seq
659 aa
AA seq
DB search
MSIFDLQSSYQPAGDQPRAIDMLERGIKANKKDQVLLGVTGSGKTFTMAHLIARTGKPAL
IMAHNKTLAAQLYSEMKSFFPNNAVEYFVSYYDYYQPEAYIANKDVFIEKDAQINERIDL
LRHSATRALLERKDAIVVASVSCIYGLGSPELYLQMTFKIEKNTKVDRNGIMRKLVDLQY
QRNDIDFKRGTFRARGDNLDIFPSHYQDRAWRISLFGDDVEKIYEFDPLTGEKIKDLEEI
TVFANSHYVTPRPTLEQSIKFIKEEMRKRVEWFREHNRLIEAQRIEERTKFDLEMMIESG
SCKGIENYSRYLSGRGAGQPPPTLFEYLPSNALLFVDESHVTVPQVGGMFNGDRARKNVL
VEYGFRLPSALDNRPLTFAEWDSMRPQTIFVSATPGKLELKYTNGEFAEQVIRPTGLIDP
ICTMKPVETQVDDLLNECRNAVEKGERVLVTTLTKKMSENLTEYLTDIGIKAVYLHSDID
TIERVEIIRDLRKGIYDVLVGVNLLREGLDIPECSLVAILDADKEGFLRSETSLIQTIGR
AARNVEGRAILYADKLTESIKRAMGETERRRKIQQQYNEEHGITPQTIKKSIRDIIESVY
EHDHLTIETEGKLESPEKIKSKIQKLHKEMLKFAAELEFEKAAEIRDQIQKLEESILFK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatttgatttacaatcaagctatcaacctgcaggggatcaaccaagagcaatt
gatatgctcgaacgggggatcaaagctaataaaaaagatcaggtgttacttggtgtaacg
ggctccggtaaaacttttaccatggcgcatcttattgcaagaaccggaaaaccggctctt
attatggcgcataataaaactctggcggctcagctatattcggagatgaaaagctttttc
cccaataatgcggttgaatattttgtttcatattatgattattatcaacctgaagcatat
atagcaaataaagatgtttttatcgaaaaagatgcgcagattaatgaaaggattgatcta
ctcaggcattccgcaaccagggcgcttttagagcgtaaagatgcaattgtagttgcctcc
gtctcatgtatatacggtctcggttcgcctgaactctatcttcaaatgacttttaaaatt
gaaaagaatactaaggttgatcgcaacggtattatgaggaaactggtagacttgcaatat
cagcgtaatgatatagattttaagcgcggtacatttagagcaaggggagataatttagat
atttttccttcacattatcaggatagagcatggagaataagcttgttcggtgatgatgta
gaaaaaatttatgaatttgatccgttaacgggagaaaagattaaagacctggaagaaatt
actgtatttgctaatagccactatgttactccaaggccaaccctcgagcaatcgattaag
tttataaaagaagaaatgcgcaagcgtgtggaatggtttcgcgagcacaatagattaatc
gaagcacagcgcattgaagagcgcactaagtttgatcttgagatgatgattgaatcggga
agctgcaagggtattgaaaattattccagatatctttccggtagaggagcagggcagccg
ccgccgacattatttgaatatttaccctctaatgcattattgttcgttgatgaaagtcat
gtaaccgtgccccaggtgggcggaatgtttaacggggatcgggctcgtaaaaatgttttg
gttgaatacgggtttagattaccttcggctttagataatcggccgcttacttttgccgaa
tgggattcaatgcgaccgcaaaccatatttgtttcagccactcccggaaagcttgaattg
aaatatacaaacggagaatttgccgaacaggtgatcaggccgaccggacttatagacccg
atatgcacgatgaagccggttgaaacccaagtagatgatttattaaatgagtgtaggaat
gcagtagaaaaaggagaaagagttctggtcacgacacttaccaaaaagatgtccgagaat
ttgaccgaatatttaaccgatatcggaattaaagcggtttatttgcactctgatattgac
accattgagcgtgtggaaattatcagagaccttagaaaaggtatttatgatgttttagtt
ggggttaacttgctaagggaagggttggatatccctgagtgctccttagttgctattctt
gatgctgataaagaaggttttttacgttcggaaacttcacttatccaaactatcggtaga
gcggcaagaaacgtagaaggcagagctattctttatgccgataaacttaccgaatcaatt
aagcgggctatgggagaaactgaaagaagaaggaagatacagcagcagtataatgaggaa
catggaattactccgcaaactattaaaaaatcaattagagatataattgaaagcgtttat
gagcatgatcatttaacgattgagactgaagggaagcttgagagccctgaaaaaattaag
tctaaaattcaaaaactacataaagaaatgcttaagtttgcagctgaacttgagtttgaa
aaagcagctgagataagggatcaaattcaaaagctggaagaaagcattctatttaaataa
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