Endosymbiont of Acanthamoeba sp. UWC8: I862_05085
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Entry
I862_05085 CDS
T03255
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eaa
Endosymbiont of Acanthamoeba sp. UWC8
Pathway
eaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I862_05085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaa03019
]
I862_05085
03016 Transfer RNA biogenesis [BR:
eaa03016
]
I862_05085
Enzymes [BR:
eaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
I862_05085
Messenger RNA biogenesis [BR:
eaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
I862_05085
Transfer RNA biogenesis [BR:
eaa03016
]
Prokaryotic type
tRNA degradation factors
I862_05085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
CDC45
DUF7307
Motif
Other DBs
NCBI-ProteinID:
AIF81573
LinkDB
All DBs
Position
1061002..1063386
Genome browser
AA seq
794 aa
AA seq
DB search
MFKLHTKIIDWNGKTLELETGKIARQADAAVVVKMGGTVVLCTVVGNKKQKEGIDFFPLT
VNYQEKFYAIGKIPGGFNKRESKPSEHETLVSRLIDRPIRPLFPQGFYNEVQVVCTVLSY
DTNYEADILSIIGASAALTISGIPFTEPVAAARVGYIDGKFVLNPTYEETKTISDLDLIV
SGTESSVLMVESAAKELSEELMLEAVMFGHKQFQPIIQVIKEFAAEVGKPAWEVSLVDNS
EIDTKVKKLAEKELKAAYAETQKQARNEKIYATEDKVIAELVTNQGLDELKVKGAFKNLQ
KDLVRSNILDNNQRIDGRNSKEIRNIVGEVDFLPKTHGSALFTRGETQAICVTTLGTESS
EQMVENLHGLRHDRFMLHYNFPPFSVGEVGRMGAPGRREIGHGKLAFRALSAMLPSKEEF
PYAIRVVSEITESNGSSSMATVCGSSMSMMAAGVPLKSSVAGIAMGLIKEGEKFSVLSDI
MGDEDYLGDMDFKVAGTAKGITALQMDIKINGINEEIMKIALSQASEGRLHILGKMANAI
STSRSELNENAPRITSIKIEKDKIREVIGSGGKVIRDICEKSGAEINIADDGTVKIASNN
DAGTQIALNMIKGITTNPEIGDIYDGVVIKLVDFGAIISFFGVREGLLHISELTNERGSN
ISNFLSLGQAVKVKVISLDHRTGKVKLTLKDKPNFSDDKKSSSQESEESTESGSKREPRE
PRGEDKREPREPRGEDRREPREPRGEDKREPREPRGESKDRDANFSRRKSGNGHKADQER
TSTTEIAKKKKRFF
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaactacacacaaaaatcattgattggaacggaaaaactttagaactggaaaca
ggaaagattgcaaggcaagcagatgccgcagtagtagtaaaaatgggtggtacagttgtt
ttatgtactgttgtcggtaataaaaagcagaaagaaggaattgattttttcccgctcacc
gttaattatcaggaaaaattttatgcaatcggtaagattcccggcggatttaataaaaga
gaaagcaagccttccgagcatgaaaccttagtttcaagacttattgataggcctattcgt
ccgcttttcccgcaagggttctataatgaagtacaagttgtatgtaccgtactttcttat
gataccaattatgaagctgacattctctctattataggtgcttcggcagctcttactatt
tcaggtattccgtttacagaaccggtagcagcagcaagagtcggatacattgacggaaaa
ttcgtactcaacccgacttatgaagaaactaaaacaatcagtgatttggacttaatagta
tcaggaacggaaagctcggttttaatggtagagtccgcagctaaagagctaagcgaagaa
ctcatgttagaagcggttatgttcgggcataagcaattccaacctataattcaggtaatc
aaagaatttgcagctgaggtcggaaaacctgcatgggaagtaagtttagttgataactcc
gagattgatacgaaagttaaaaagctagctgaaaaagagttgaaagcagcttatgctgag
actcaaaagcaagcgagaaatgagaaaatttatgcgaccgaagataaagttatagcagag
ttggtcactaaccaaggtctggatgagcttaaagtcaaaggggcttttaaaaacttacaa
aaagacttagtccgcagcaatattttagataacaatcaaaggattgacggcaggaactcg
aaagaaataagaaacattgtcggtgaagtagattttctacctaaaactcatggttcagca
ttatttaccaggggagaaacccaagcgatttgcgtaacaacactcggtactgaatcaagt
gaacaaatggttgagaatttacacgggttacgccatgatcgttttatgttgcattataat
tttccgccgttttctgtcggtgaagttggtagaatgggtgcgccgggcagaagagaaatt
gggcatggtaagttggctttcagagctttaagtgcgatgcttccttcaaaagaagaattt
ccttatgctataagagtggtttctgaaattaccgaatccaatggttcttcttcaatggca
actgtttgcggctcttctatgtctatgatggcggcaggcgttccgcttaagtcttcagta
gcaggtattgctatgggtctcataaaagaaggagagaaattttccgtactttctgatatc
atgggtgatgaagattacttaggcgatatggatttcaaagttgcaggaacagcaaaagga
atcaccgccttacaaatggatatcaaaattaacggtattaatgaagagattatgaaaata
gctctttctcaagccagtgaaggcagacttcatattttaggtaagatggctaatgcgatt
tctacatcaagatccgaactgaatgaaaatgctccacgcattacctcaattaaaattgaa
aaagataaaatccgtgaagtaataggttcaggcggaaaagtaatccgtgatatttgtgaa
aaaagcggagctgagattaatattgctgatgacggaactgttaaaattgcctcaaataat
gatgccggcactcaaatagcacttaacatgattaagggtattactactaaccctgaaatt
ggcgatatttatgacggtgttgttattaagctcgttgatttcggtgcaattatttctttc
ttcggtgtacgtgaaggtttattacatatctcggaactaaccaacgaaagaggcagcaat
atctctaacttcttaagtcttggacaagctgtgaaagtgaaggtgatctcgctagaccat
agaacaggtaaagttaagttaactctaaaagataaacctaatttttctgatgacaagaaa
tcttcttcccaggaatccgaagaatctacagaaagtggaagtaaacgtgaaccgagagaa
cctagaggtgaagataagcgtgagccaagagaacctagaggcgaagataggcgtgagcca
agagaacctagaggtgaagataagcgcgagccaagagaacctagaggtgaaagcaaagac
agagatgctaattttagcagaagaaaatccggaaatggtcataaagctgaccaagaaaga
acatctaccactgaaatagctaagaaaaagaaacgtttcttctaa
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