Endosymbiont of Acanthamoeba sp. UWC8: I862_05775
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Entry
I862_05775 CDS
T03255
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
eaa
Endosymbiont of Acanthamoeba sp. UWC8
Pathway
eaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
eaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I862_05775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eaa03021
]
I862_05775
03400 DNA repair and recombination proteins [BR:
eaa03400
]
I862_05775
Enzymes [BR:
eaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I862_05775
Transcription machinery [BR:
eaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I862_05775
DNA repair and recombination proteins [BR:
eaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I862_05775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AIF81709
LinkDB
All DBs
Position
complement(1214371..1215399)
Genome browser
AA seq
342 aa
AA seq
DB search
MAEGAKNIISGNWTSLIKPTQYFLESISNNTAVFKVEPLERGFGVTLGNAIRRILLSSLQ
GAAIISVKVEGVDHEFSSVPGVREDVTDMILNIKSIVVKYGGNERKRMRLSAVGPCVVTA
AMIQTVDDMEIINKDLVICHLDRDAKLDMEFSVGTGKGYITASENRYMEMPIGVIPVDSI
FSPVKKVTFKVENSRVGSETEYDKLFLTIETNGSITPDLALSLAAKILQDQLQIFVNFDE
VEEAIEIEEEKLPFDPQLLKKVDDLELSVRSHNCLKNDNIRYIGDLVVKTESEMLKTPNF
GRKSLNEIKEVLSAMGLKFGMDIVGWPPENVEELVRKYEEQN
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggagcaaagaacatcatttcaggcaattggacatctttaattaaacctacg
cagtactttttggaaagtatttcaaataatactgcagtgtttaaggtggagcctcttgag
agggggtttggtgttactcttggcaatgcaattagaagaattttactatcttctcttcag
ggagcagcaataatttctgttaaggttgaaggtgttgaccacgaattttcaagcgttcca
ggtgttagagaagatgttaccgacatgattttaaatataaaatcaattgttgttaagtat
ggcggtaatgaaagaaagcggatgagattatctgcagttgggccttgtgtagttactgcg
gcaatgattcaaactgttgatgatatggaaattattaataaagatttagtaatttgccat
cttgatagagatgctaagcttgatatggaattcagcgtcggtaccggaaaaggatatata
actgcgagtgaaaataggtacatggagatgccgatcggcgttattcctgtcgattcaata
ttttcaccggttaagaaagtaacttttaaggtagaaaacagccgtgtaggttccgagacc
gaatacgataaactattcctcactattgaaactaatggctcgataactcctgatctagct
ttatcgctagctgcaaaaattcttcaagaccaattacaaatttttgttaattttgatgaa
gttgaagaagcaattgaaattgaagaagagaaattgccgtttgaccctcaactacttaag
aaagttgatgatcttgagctttcggtgagatcgcataattgtcttaaaaatgataatatt
cgttatatcggtgatcttgtagttaaaactgaaagtgaaatgcttaagactcctaatttc
ggccgtaagtcattaaatgaaattaaagaagtcttatctgcaatggggctaaagtttggt
atggatatagttggctggcctcctgaaaatgttgaagagctagttagaaaatatgaagag
caaaattaa
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