Endosymbiont of Acanthamoeba sp. UWC8: I862_06120
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Entry
I862_06120 CDS
T03255
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
eaa
Endosymbiont of Acanthamoeba sp. UWC8
Brite
KEGG Orthology (KO) [BR:
eaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eaa03032
]
I862_06120
03036 Chromosome and associated proteins [BR:
eaa03036
]
I862_06120
03400 DNA repair and recombination proteins [BR:
eaa03400
]
I862_06120
DNA replication proteins [BR:
eaa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I862_06120
Chromosome and associated proteins [BR:
eaa03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
I862_06120
DNA repair and recombination proteins [BR:
eaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
I862_06120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AIF81778
LinkDB
All DBs
Position
1264143..1264457
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AA seq
104 aa
AA seq
DB search
MDKILYKKDVVTWLKRFNRDLPLFKLEEIANIFFQEISVALICGDRIELRGFGSMLVKKR
AAKVGRNPRTNQQLEVGNKGSLQFRPSKELLKKLNTLKKPANFA
NT seq
315 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcttatataaaaaagatgtagttacatggttaaaaaggtttaatagagat
ttacctttatttaaattagaagaaatagcaaatatattttttcaagaaatctctgtagca
ttaatatgcggtgacagaattgaattaagaggattcggctctatgttggtaaagaaaagg
gcagctaaagtcggaaggaaccctagaactaatcagcaattagaggtcgggaataaaggc
tcattacaatttagacccagcaaggaacttttaaaaaaacttaataccctaaaaaaaccg
gctaattttgcttag
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