Escherichia coli ABU 83972: ECABU_c04740
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Entry
ECABU_c04740 CDS
T01995
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
eab
Escherichia coli ABU 83972
Brite
KEGG Orthology (KO) [BR:
eab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eab03400
]
ECABU_c04740 (sbcC)
DNA repair and recombination proteins [BR:
eab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECABU_c04740 (sbcC)
Archaeal homologous recombinant proteins
ECABU_c04740 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_15
ABC_tran
cobW
RsgA_GTPase
nSTAND3
AAA_21
NTPase_1
AAA_22
AAA_14
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
ADN45076
LinkDB
All DBs
Position
complement(496394..499537)
Genome browser
AA seq
1047 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCA
DGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTE
IYGKISAMVFEQHKSARTELEKLQAQASGVALLTPEQVQSLTASLQVLTDEEKQLLTAQQ
QEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIA
EHSAALAHTRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNAWLQEHDRFRQ
WNNELAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVASALAQHAE
QRTLRQRLVALHGQIVPQQKRLAQLQVTIQNVTQEQTQRNAALNEMRQRYKEKTQQLADV
KTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVK
KLGEEGATLRGQLDALTKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPQDDIQP
WLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQE
DEEESWLATRQQEAQSWQHRQNELTALQNRIQQLTPILETLPQSDELPHSEETVVLENWR
QVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLT
QLEQLKQNLENQRRQAQTLVTQTAETLTQHQQHRPGGLSLTVTVEQIQQELAQTHQKLRE
NTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQG
LTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSL
ALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMK
ERIPVQIKVKKINGLGYSKLESAFAMK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagcctgcgcctgaaaaacctgaactcattaaaaggcgaatggaagatt
gatttcacccgcgagccgttcgccagcaacgggctgtttgctattaccggcccaaccggt
gcggggaaaaccaccctgctggacgccatttgtctggcgctgtatcacgaaaccccgcgc
ctctctaacgtttcacaatcgcaaaatgatctcatgactcgcgataccgccgaatgtctg
gcggaagtggagtttgaagtcaaaggtgaagcgtatcgcgcgttctggagccagaatcgg
gcgcgtaaccagccggacggtaatttgcaggtgccacgcgtagagctggcgcgctgcgca
gacggcaaaattctcgccgacaaagtgaaagataagctggaactgacggcgacgttaacc
ggactggattacgggcgcttcacccgttcgatgctgctttcgcaggggcaatttgctgcc
ttcctgaatgccaaacccaaagaacgcgcggaattgctcgaggagttaaccggcactgaa
atctacgggaaaatctcggcgatggtttttgagcagcacaaatcggcccgcacagagctg
gagaagctgcaagcgcaggccagcggcgtcgcgttgctcacgccagaacaagtgcaatcg
ctgacagcgagtttgcaggtacttactgacgaagaaaaacagttacttaccgcgcagcag
caagaacaacaatcactaaactggttaacgcgtctggacgaattgcagcaagaagccagc
cgccgtcaacaggcattgcaacaggcgttagccgaagaagaaaaagcgcaacctcaactg
gcggcgctcagtctggcacaaccggcacgaaatcttcgtccacactgggaacgcatcgca
gaacacagcgcggcgctggcgcatactcgccagcagattgaagaagtaaatactcgctta
cagagcacaatggcgcttcgggcgagcattcgccaccacgcggcgaagcagtcagcagaa
ttacagcagcagcaacaaagtctgaatgcctggctacaggaacacgaccgcttccgtcag
tggaacaacgaactggcgggttggcgtgcgcagttctcccaacaaaccagcgatcgcgag
catctgcggcaatggcagcaacagttaacccatgcagagcaaaaacttaatgcgcttgcg
gcgattacgttgacgttaaccgccgatgaagttgctagcgccctggcgcaacatgctgag
caacgcacgctgcgtcagcgcctggtcgcgctgcatggacagattgttccccaacaaaaa
cgcctggcgcaattacaggtcactatccagaatgtcacgcaagaacagacgcaacgtaac
gccgcacttaacgaaatgcgccagcgttataaagaaaagacgcagcaacttgccgatgtg
aaaaccatttgcgagcaggaagcgcgcatcaaaacgctggaagctcaacgtgcacagtta
caggcgggtcagccttgtccactttgtggttccaccagccacccggcggtcgaggcgtat
caggcgctggagcctggcgttaatcagtctcgattactggcgctggaaaacgaagttaaa
aagctcggtgaagaaggtgcgacgctacgtgggcaactggacgccttaacaaagcaactt
cagcgtgatgaaaacgaagcgcaaagcctccgacaagatgagcaagcacttactcaacaa
tggcaagccgtcacggccagcctcaatatcaccttgcagccacaggacgatattcaaccg
tggctagatgcacaagatgagcacgaacgccagctgcggttactcagccaacggcatgaa
ttacaagggcagattgccgcgcataatcagcaaattatccagtatcaacagcaaattgaa
caacgccagcagcagctcttaacggcattggcgggttatgcactgacattgccacaggaa
gatgaagaagagagctggttggcgacgcgtcagcaagaagcgcagagctggcagcatcgc
cagaacgaattaaccgcgctgcaaaaccgtattcagcaactgacgccgattctggaaacg
ttgccgcaaagtgatgaactcccgcacagcgaagaaactgtggtgctggaaaactggcgg
caggttcatgaacaatgtctcgcattacacagccagcagcagacgttacagcaacaggat
gttctggcggcgcaaagtctgcaaaaagcccaggcgcagtttgacaccgcgctacaggcg
agcgtctttgacgatcagcaggcgttccttgcggcgctaatggatgaacaaacactaacg
cagctggaacagctcaagcagaatctggaaaaccagcgccgtcaggcgcaaacgctggtc
actcagacagcagaaacgctgacacagcatcagcaacaccgacctggcgggttatctctc
actgtgacggtggagcagattcagcaagagttagcgcaaactcaccaaaagttgcgtgaa
aacaccacgagtcaaggcgagattcgccagcagctgaagcaggatgcagataaccgtcag
caacaacaaaccttaatgcagcaaattgctcaaatgacgcagcaggttgaggactgggga
tatctgaattcgctaataggttccaaagagggcgataaattccgcaagtttgcccaaggg
ctgacgctggataatttagtccatctcgctaatcagcaacttacccggctgcacgggcgc
tatctgttacagcgcaaagccagcgaagcgctggaagttgaggttgttgatacctggcag
gctgatgcggtacgcgatacccgtaccctttccggcggcgaaagtttcctcgtcagtctg
gcgctggcactggcgctttcagatctggtcagccataaaacgcgtattgactcgctgttc
cttgatgaaggttttggcacactggatagcgaaacgctggataccgcccttgatgcgctg
gatgccctgaatgccagtggcaaaaccatcggggtgattagccacgttgaggcgatgaaa
gagcgtattccggtgcagatcaaagtgaagaagatcaatggactgggctacagcaaactg
gaaagtgcgtttgcaatgaaataa
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integrated database retrieval system
